Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: OBART05G18100.1

Description

Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A0D3G865]

Location

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features and maps to 40 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OBART05G18100.1	2142	713aa	OBART05G18100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3G865	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OBART05G18100.2	2049	682aa	OBART05G18100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3G866	-
-	OBART05G18100.3	1302	433aa	OBART05G18100.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3G867	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,142 bps, Translation length: 713 residues

Version

OBART05G18100.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.