Transcript: OBART11G19020.2

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OBART11G19020.1	1497	278aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3HNQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OBART11G19020.3	1723	276aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3HNQ7	-
-	OBART11G19020.2	1498	277aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3HNQ6	-
-	OBART11G19020.4	1486	276aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3HNQ7	-

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

loadingloaded

▼▲


..........cacagctgctcctcctcgggcttgactcgtctcgtctcgactccacgaac
GAACGAAACACGCCTTCTTCCCCAACGACCAAACCAAAGTTTGGGTGAAGAAAAAAAAAA
TATCGCCGCGTTTTTATCCCCCACGAGACGAGTCGAGACGACCAAAAGCCTAACTAATCG
GGGGCAAGACGAGGAGGAGAGCGGATTCTCGTCGGCTTCGGGGACCGGAAGAGGAGAGCA
GACCAACCCCGCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTA
G                                                           
gtgcgtgcgatccccttccccttct..........tgtttgccttgttggtttcttgcag
GAATTTGATTCTCCTGGGGAATTAACTTGTTAGGGGAAAAGGAATTTGGGATGGGCGACC
ATGTGGTGGTGAATGTGGAAGGCTTAGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTG
AGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTTG
AGGAGGGCGGTGGAGAGGAGGAGCCGCTCATCCAGGCGGCGGAGTGCCGTATATGCCAGG
AGGAGGATAGCGTCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAG    
gtccagctcctcctcttttgatgtt..........acaattttactttcttcatgtacag
TATGCTCATAGAGCTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAA
ATCTGTCATGAG                                                
gtcagtaagatttcttctctactac..........ttgaggcttgtattttcttctgcag
CAATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGAT
ATCGG                                                       
gtaagttatttctgtacttattttg..........ctaagtcaatactgttggcttgcag
TGGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTCTTCT
TGAAACTGAGTATGATGAATATGCTGGTACTGATGCTAGTGGTGCTGCATTCTGCCGTTC
TGCTGCACTTATA                                               
gtaagtactaaacaacaattcaagg..........tctaaaatccttggtgcttttccag
CTAATGGCCTTGTTGCTATTGAGGCATGCTTTGTCTATCTCAGACAATGAAGGAGATGAT
GATGCTTCTACCAT                                              
gttctcggttagtcttgtgttcctt..........attaatgttcttcaatgtccaacag
CTCTTTCTACTTCGAGCTGCTGGATTTCTGCTGCCATGCTATATCATGGCTTGGATATTC
AGTATTTTGCATCGCCGGCGACAAAGACAG                              
gtacttctaattctgtatggatctc..........tctttcgtacttgtacttttggcag
GAAGCGGCTGCAATTGCTGCAGCAGAGGTGGCATTCATCCTGCAATCAGCCCAAGGCCAT
GCCCTTCAGTTCACCATCGCTCCAGACTCCCCCGCCACTCCACAGCATGAGCCACAGCAG
CAGCAGCCGCAGCCGCAG                                          
caatagctagttacttcagtagcgt..........tgagccacagcagcagcagccgcag
CCGCAGCAATAGCTAGTTACTTCAGTAGCGTCTCTCAACTACTGACTCGCACATGCAGAA
GAAGAGGATACCTCAGCTAGTGGCCGCTTTGTTGTTTCCTGTTGCAACTGGCCCAGGGAC
GCTAAGAACCTGGCCTCGCCTTGTGTGGCCGGGTAGAAACCTTGTAAAACGCCAGAGATT
CATTTGTTGCAAGCGACCGCAGCTTAAGCCCCGCTACCCTTCGATTTGTCTCTGTGTAAC
TCAAGCATTGATTTATTGTAAATTTGTCGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTG
CCAAGTGTTTTACTGCCATGTACAGTATTATTACATGGGAGCTTTTATCTTTCAAAGAAT
TAATCTGAGTGAGTGTGAAACTGTTAGGC                               
tacgtttgctgagaggttaagcccctgtttgggatgcttctggcttctgc..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........cacagctgctcctcctcgggcttgactcgtctcgtctcgactccacgaac
1	OBART11G19020.2.exon1	18,813,453	18,813,693	-	-	241	GAACGAAACACGCCTTCTTCCCCAACGACCAAACCAAAGTTTGGGTGAAGAAAAAAAAAA TATCGCCGCGTTTTTATCCCCCACGAGACGAGTCGAGACGACCAAAAGCCTAACTAATCG GGGGCAAGACGAGGAGGAGAGCGGATTCTCGTCGGCTTCGGGGACCGGAAGAGGAGAGCA GACCAACCCCGCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTA G
	Intron 1-2	18,813,694	18,814,155			462	gtgcgtgcgatccccttccccttct..........tgtttgccttgttggtttcttgcag
2	OBART11G19020.1.exon3	18,814,156	18,814,451	-	0	296	GAATTTGATTCTCCTGGGGAATTAACTTGTTAGGGGAAAAGGAATTTGGGATGGGCGACC ATGTGGTGGTGAATGTGGAAGGCTTAGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTG AGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTTG AGGAGGGCGGTGGAGAGGAGGAGCCGCTCATCCAGGCGGCGGAGTGCCGTATATGCCAGG AGGAGGATAGCGTCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAG
	Intron 2-3	18,814,452	18,816,335			1,884	gtccagctcctcctcttttgatgtt..........acaattttactttcttcatgtacag
3	OBART11G19020.1.exon4	18,816,336	18,816,407	0	0	72	TATGCTCATAGAGCTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAA ATCTGTCATGAG
	Intron 3-4	18,816,408	18,817,198			791	gtcagtaagatttcttctctactac..........ttgaggcttgtattttcttctgcag
4	OBART11G19020.1.exon5	18,817,199	18,817,263	0	2	65	CAATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGAT ATCGG
	Intron 4-5	18,817,264	18,817,387			124	gtaagttatttctgtacttattttg..........ctaagtcaatactgttggcttgcag
5	OBART11G19020.1.exon6	18,817,388	18,817,520	2	0	133	TGGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTCTTCT TGAAACTGAGTATGATGAATATGCTGGTACTGATGCTAGTGGTGCTGCATTCTGCCGTTC TGCTGCACTTATA
	Intron 5-6	18,817,521	18,817,866			346	gtaagtactaaacaacaattcaagg..........tctaaaatccttggtgcttttccag
6	OBART11G19020.2.exon6	18,817,867	18,817,940	0	2	74	CTAATGGCCTTGTTGCTATTGAGGCATGCTTTGTCTATCTCAGACAATGAAGGAGATGAT GATGCTTCTACCAT
	Intron 6-7	18,817,941	18,818,068			128	gttctcggttagtcttgtgttcctt..........attaatgttcttcaatgtccaacag
7	OBART11G19020.2.exon7	18,818,069	18,818,158	2	2	90	CTCTTTCTACTTCGAGCTGCTGGATTTCTGCTGCCATGCTATATCATGGCTTGGATATTC AGTATTTTGCATCGCCGGCGACAAAGACAG
	Intron 7-8	18,818,159	18,819,174			1,016	gtacttctaattctgtatggatctc..........tctttcgtacttgtacttttggcag
8	OBART11G19020.2.exon8	18,819,175	18,819,312	2	2	138	GAAGCGGCTGCAATTGCTGCAGCAGAGGTGGCATTCATCCTGCAATCAGCCCAAGGCCAT GCCCTTCAGTTCACCATCGCTCCAGACTCCCCCGCCACTCCACAGCATGAGCCACAGCAG CAGCAGCCGCAGCCGCAG
	Intron 8-9	18,819,313	18,824,336			5,024	caatagctagttacttcagtagcgt..........tgagccacagcagcagcagccgcag
9	OBART11G19020.2.exon9	18,824,337	18,824,725	2	-	389	CCGCAGCAATAGCTAGTTACTTCAGTAGCGTCTCTCAACTACTGACTCGCACATGCAGAA GAAGAGGATACCTCAGCTAGTGGCCGCTTTGTTGTTTCCTGTTGCAACTGGCCCAGGGAC GCTAAGAACCTGGCCTCGCCTTGTGTGGCCGGGTAGAAACCTTGTAAAACGCCAGAGATT CATTTGTTGCAAGCGACCGCAGCTTAAGCCCCGCTACCCTTCGATTTGTCTCTGTGTAAC TCAAGCATTGATTTATTGTAAATTTGTCGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTG CCAAGTGTTTTACTGCCATGTACAGTATTATTACATGGGAGCTTTTATCTTTCAAAGAAT TAATCTGAGTGAGTGTGAAACTGTTAGGC
	3' downstream sequence						tacgtttgctgagaggttaagcccctgtttgggatgcttctggcttctgc..........

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Transcript: OBART11G19020.2

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