5' upstream sequence
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"class":"ef","text":"Flanking sequence","label":"#008000"}}},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#008000"]]},"seq":[{"style":[1]}]}}
..........cacacctcctcccccgcctcctcctctagggtttcctcccaatcccctcc
1 OBART09G09010.1.exon1 10,511,944 10,511,872 0 1 73
{"provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},{"style":[1,-12,0]}],"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null},"flanking":{"default":null,"label":"#008000","class":"ef","text":"Flanking sequence"}}},"expect":[]},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only"}
ATGGCCAAGACCAAGCAGGGCAAGAAGGACGTCGAATCCTACACCATCAAGGGCACCACC AAGGTCGTCCGAG
Intron 1-2 10,511,871 10,511,789 83
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"expect":[],"legend":{"_messages":[],"exons/Introns":{"exon1":{"text":"Translated sequence","class":"e1","label":"#1044ee","default":null},"intron":{"label":"#aaaaaa","class":"ei","text":"Intron sequence","default":null},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null}}},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}]}}
gtacgggccgcttctcgctttcttc..........tgatgagggtttgtgggtgtggaag
2 OBART09G09010.2.exon2 10,511,788 10,511,497 1 2 292
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},-3,{"style":[1,-51,0]}],"legend":{"_messages":[],"exons/Introns":{"exon1":{"text":"Translated sequence","class":"e1","label":"#1044ee","default":null},"intron":{"default":null,"label":"#aaaaaa","class":"ei","text":"Intron sequence"},"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"}}},"expect":[]}}
TGGGGGATTGCGTGCTGATGCGGGCGTCGGACACGGAGAAGGCGCCGTACGTGGGGAGGG TGGAGAGGCTGGAGACGGACGGGAGGGGGAGCGTGCGGGTGCGGTGGTACTACCGGCCGG AGGAGTCCAAGGGCGGGAGGAGGCAGTTCTATGGCGCCAAGGAGCTGTTCCTCTCCGACC ACTTCGACACCCAGAGCGCCCACACCATCGAGGGCAAGTGCGTCGTCCACTCCTTCAAGA ACTACACCAAGCTCGACAACGTCGGCCCCGAGGACTTCTTCTGCCGCTTCGA
Intron 2-3 10,511,496 10,511,320 177
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"expect":[],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}],"legend":{"_messages":[],"exons/Introns":{"exon1":{"label":"#1044ee","text":"Translated sequence","class":"e1","default":null},"intron":{"default":null,"label":"#aaaaaa","class":"ei","text":"Intron sequence"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"}}}}}
gtacaaggccgccaccggcgccttc..........tttgggtgtgtgtgtgtgtgtgcag
3 OBART09G09010.1.exon3 10,511,319 10,511,251 2 2 69
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},{"style":[1,-8,0]}],"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"exon1":{"default":null,"label":"#1044ee","text":"Translated sequence","class":"e1"},"intron":{"label":"#aaaaaa","text":"Intron sequence","class":"ei","default":null},"flanking":{"default":null,"class":"ef","text":"Flanking sequence","label":"#008000"}}}}}
GTACTGCAAGTGCGAGATGCCGTATAACCCGGATGATCTAATGGTGCAGTGCGAGGGATG CAAGGACTG
Intron 3-4 10,511,250 10,509,924 1,327
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"exon1":{"default":null,"text":"Translated sequence","class":"e1","label":"#1044ee"},"intron":{"text":"Intron sequence","class":"ei","label":"#aaaaaa","default":null},"flanking":{"default":null,"label":"#008000","class":"ef","text":"Flanking sequence"}}},"flourishes":{},"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"expect":[]}}
gtaaatcacttggggacatcctacc..........aatattcaacttttaacttgtgcag
4 OBART09G09010.1.exon4 10,509,923 10,509,785 2 0 139
{"provisional":{"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},-1,{"style":[1,-18,0]}],"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"exon1":{"text":"Translated sequence","class":"e1","label":"#1044ee","default":null},"intron":{"default":null,"class":"ei","text":"Intron sequence","label":"#aaaaaa"},"flanking":{"default":null,"class":"ef","text":"Flanking sequence","label":"#008000"}}}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only"}
GTTCCATCCATCTTGTATGGGAATGACCATTGAGCAGGCCAAAATATTAGATCATTTCCT GTGCGCAGATTGTGTCAAAGAAAATGGTACGAAGAGACCTTCAAATTCATATCCAGCATC ATCAAATTCTGATTCTAAG
Intron 4-5 10,509,784 10,509,622 163
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}],"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"exon1":{"text":"Translated sequence","class":"e1","label":"#1044ee","default":null},"intron":{"default":null,"label":"#aaaaaa","class":"ei","text":"Intron sequence"},"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null}}},"expect":[]}}
gttggttacttaagctctatctctt..........ttgtttttgcttctcaattactcag
5 OBART09G09010.1.exon5 10,509,621 10,509,610 0 0 12
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"flourishes":{},"seq":[{"style":[1,-11,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"_messages":[],"exons/Introns":{"exon1":{"default":null,"text":"Translated sequence","class":"e1","label":"#1044ee"},"intron":{"text":"Intron sequence","class":"ei","label":"#aaaaaa","default":null},"flanking":{"text":"Flanking sequence","class":"ef","label":"#008000","default":null}}},"expect":[]}}
GTCATTATTTGA
3' downstream sequence
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART09G09010;r=90X0P+010509610-10511944;t=OBART09G09010.2;db=core;time=1754574999467.467;adorn=only","provisional":{"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#008000"]]},"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"exon1":{"default":null,"label":"#1044ee","class":"e1","text":"Translated sequence"},"intron":{"text":"Intron sequence","class":"ei","label":"#aaaaaa","default":null},"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"}}},"expect":[]}}
tgttgacggagaaatactcaacttctttttcaaactttgctgtcatgaac..........
Oryza barthii (O.barthii_v1) ▼ 
Summary
Sequence![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
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