Oryza barthii (O.barthii_v1)
Location
About this transcript

This transcript has 1 exon, is annotated with 15 domains and features and maps to 12 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-OBART08G14180.11173390aa
 
Protein coding
A0A0D3H039 Ensembl Canonical
Exons/ Introns
  • Translated sequence
  • Flanking sequence
Markup
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........gaagagagttctctagctcgggaagcattcagcatctcctttctcttccg
1OBART08G14180.1.exon114,651,68214,650,510001,173
ATGGCCGCCGTCTCAACTGCGTCTTCCACCAGCAGCCCACCGCACAACACCACCATGTCC
ACTACTCACTCCACTGAGCTTGTCAAGGGCTCGCATGAGTTCACCGTCGCCGGCTACAGC
CTGCAGAAGAGGAACGGCACCGGACACTTCGTCAGGTCCGGCTCATTCGAGGTCGGTGGA
TACAGCTGGGCGATCCGATTCTACCCTGCTGGCAGCACGAAGGAAGAAGAAAGACACGTG
TCCGTGTACCTCGAGCTGCGAAGCACTGTGGTAGAGAAAGTTACCGCGAGGTTCAGTTTC
CACGTCCATGGCGCTAGCGCGAGCTCGTCGCCCTGGGGCCACTTTAGCGACTTCACACCC
AGCACCGAATCATGGGGGTACGATAAATTTATGGAGATACAAACCGTGGAGTCGGAGTAC
CTAATCAACGACTGCCTGGCGATGCACTGTGACGTGGAAGTTGTCAAGGAGTTGAAGACC
GGAGCAACCGTGAGCCCCTTCATCACGGTGCCGCCGCCCAGCCTCTCCCGTCATGTCGAG
CAGCTGCTGGAGAGCAAGCAAGGCTCGGACGTGACGTTCCAGGTGGAACAGAGCGAGTAC
GACGCGCACAGAGCGGTGCTCGCGGCGCGGTCACCGGTGTTCAGCGCGCAGTTCTTCGGG
CAAATGGCGGGCAACGGCAGCGGTGGCAGCGGCGGCGGCCGGCAGCGTGTGCGGATCCAC
GACATGAAACCGGCAGTCTTCGAGGCCGTGCTCCACTTNGTCTACACCGACACGTTGCCG
CCGGTCGAGGAGTTCGATTTCCTGCTGAGCGGCTTTAGCCACCGTGCCAAGCTCGTAGAA
GCAGCGGCGGCCGGCTGCGGCTCGAGAGAAGATCTGAGGGTGATGGTCGGCGAGTGGCTC
GCGGCGGCGGACATGTACGATCTGGAGAGGATGAGGCTGCTGTGCGAGGACGCGCTGTGC
CAGACCATCGGCGTGGCGAACGCAGCGGCGACGCTGCGGCTGGCTGACCGTCACCATTGC
CCGCAGCTGAAGGCGTTCTGCATGGAGTACGTCGCGTCGCCTGGCATGCTGGCGGCTGTG
GTGGCGACCGAGGGGTTCAGGGAGCTCAAGGCTTCCAGTCCATCTCTTCTCGCCGAGGTG
CTGGAGAAACTTGGAAGCTGCAGCTTGGAATAA                           
3' downstream sequence
gcggtacactcccatttctttaacccaacatttagtccctgcaacattga..........