5' upstream sequence
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null}}},"expect":[],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#008000"]]},"seq":[{"style":[1]}]},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only"}
..........tcggacgcgcccactagcaggcagccaacccacacgcgagctagggtttc
1 OBART05G09180.1.exon1 7,972,282 7,972,644 - 1 363
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"},"utr":{"class":"eu","label":"#cd6839","default":null,"text":"UTR"},"exon1":{"text":"Translated sequence","label":"#1044ee","default":null,"class":"e1"}}},"seq":[{"style":[2]},{"style":[2,-28,1]},{"style":[1]},-3,{"style":[1,-2,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"],[7,"cd6839"]]},"flourishes":{}}}
TCCTCCGCCGCATCCAGAGTTCCAGAACCCCCACCTCCCTAACCCTAACCCTAACCCGAC CCATCCTCCCCGGCGGCGGCGAAGAGAAG ATGAGGCCGATCCTGATGAAGGGGCACGAGC GGCCGCTGACATTCCTCCGGTACAACCGCGACTCCACCCGCCTCATCACCGGCAGCGCCG ACCAGACCGCCAAGCTCTGGGACGTGCAGACCGGGGCGGAGCTCTTCACCTTCCGCTTCG ACGCCCCCGCCCGCTCCGTCGAGTTCGCCATCGGCGACGGTCTCGCCGTCATCACCACCG ACAACTTCATGGGTAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGACGACCCCGATG ACC
Intron 1-2 7,972,645 7,973,279 635
{"provisional":{"seq":[{"style":[1]}],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"utr":{"class":"eu","label":"#cd6839","default":null,"text":"UTR"},"exon1":{"class":"e1","label":"#1044ee","default":null,"text":"Translated sequence"}}}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only"}
gtaaggcgcctcttctctaaccttc..........ctgaagtgtgttcttgtggatgaag
2 OBART05G09180.1.exon2 7,973,280 7,973,407 1 0 128
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","label":"#008000","text":"Flanking sequence","default":null},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"utr":{"class":"eu","label":"#cd6839","default":null,"text":"UTR"},"exon1":{"class":"e1","text":"Translated sequence","label":"#1044ee","default":null}}},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},-1,{"style":[1,-7,0]}]}}
AGTCGGAGGAGTCTCTTCTCGTGATTTCTGGCATCAAGGGGAGGATTAACAGGGCCGTGT GGGGGCCGTTGAACAGGACCATCATCACCGCCGGTGAGGATGCCACCATCCGCATTTGGG ACACCGAG
Intron 2-3 7,973,408 7,973,980 573
{"provisional":{"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{},"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","label":"#008000","default":null,"text":"Flanking sequence"},"intron":{"default":null,"label":"#aaaaaa","text":"Intron sequence","class":"ei"},"utr":{"text":"UTR","label":"#cd6839","default":null,"class":"eu"},"exon1":{"class":"e1","default":null,"label":"#1044ee","text":"Translated sequence"}}}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only"}
gttagcttgcatttacaacatttgc..........attctgtttggtttggcatgtgcag
3 OBART05G09180.1.exon3 7,973,981 7,974,100 0 0 120
{"provisional":{"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"label":"#008000","default":null,"text":"Flanking sequence","class":"ef"},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"utr":{"class":"eu","label":"#cd6839","default":null,"text":"UTR"},"exon1":{"class":"e1","default":null,"label":"#1044ee","text":"Translated sequence"}}},"seq":[{"style":[1]},-1],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only"}
ACTGGAACATGTCTGATGCAGTCAGACAATGAACAAGGACATCAGAAAACAATCACTTCT CTTTCAAAATCTGCAGATTGGTCACATTTCCTAACAGGCTCCTTGGATAAGTCTGCTAAG
Intron 3-4 7,974,101 7,974,204 104
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"utr":{"label":"#cd6839","text":"UTR","default":null,"class":"eu"},"exon1":{"class":"e1","label":"#1044ee","default":null,"text":"Translated sequence"}}},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}]}}
gtgatattttgttgatgttgctagc..........gacatgtacattgctatctggctag
4 OBART05G09180.1.exon4 7,974,205 7,974,294 0 0 90
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null},"intron":{"text":"Intron sequence","label":"#aaaaaa","default":null,"class":"ei"},"utr":{"class":"eu","text":"UTR","label":"#cd6839","default":null},"exon1":{"class":"e1","default":null,"label":"#1044ee","text":"Translated sequence"}}},"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"flourishes":{},"seq":[{"style":[1]},{"style":[1,-29,0]}]}}
CTATGGGATACAAGAACTCTGACCCTGATCAAGACATATGTCACTGAGCGACCTGTGAAT GCTGTTGACATCTCTCCTCTTCTTGACCAT
Intron 4-5 7,974,295 7,974,947 653
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","default":null,"label":"#008000","text":"Flanking sequence"},"intron":{"default":null,"label":"#aaaaaa","text":"Intron sequence","class":"ei"},"utr":{"text":"UTR","label":"#cd6839","default":null,"class":"eu"},"exon1":{"text":"Translated sequence","label":"#1044ee","default":null,"class":"e1"}}},"expect":[]}}
gtatgtgcctatgttacaataccta..........tcgcaagaaatctttgttgtgttag
5 OBART05G09180.1.exon5 7,974,948 7,975,034 0 0 87
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},{"style":[1,-26,0]}],"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"utr":{"class":"eu","label":"#cd6839","default":null,"text":"UTR"},"exon1":{"label":"#1044ee","default":null,"text":"Translated sequence","class":"e1"}}}}}
GTGGTTATCGGAGGTGGTCAAGATGCGATGAATGTGACTATGACAGATCGTCGAGCGGGG AAATTTGAAGCGAAATTCTTTCACAAG
Intron 5-6 7,975,035 7,975,147 113
{"provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}],"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"label":"#008000","default":null,"text":"Flanking sequence","class":"ef"},"intron":{"text":"Intron sequence","label":"#aaaaaa","default":null,"class":"ei"},"utr":{"class":"eu","label":"#cd6839","text":"UTR","default":null},"exon1":{"text":"Translated sequence","label":"#1044ee","default":null,"class":"e1"}}}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only"}
gtcagttcttcacacgcggtttcta..........gcaataagacacattttatttttag
6 OBART05G09180.1.exon6 7,975,148 7,975,227 0 2 80
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"seq":[{"style":[1]},{"style":[1,-19,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","default":null,"label":"#008000","text":"Flanking sequence"},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"utr":{"class":"eu","label":"#cd6839","default":null,"text":"UTR"},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"}}},"expect":[]}}
ATTTTGCAAGAGGAAATTGGTGGTGTTAAAGGCCATTTCGGACCAATTAACGCACTGGCA TTTAATCCTGATGGACGGAG
Intron 6-7 7,975,228 7,976,836 1,609
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","label":"#008000","default":null,"text":"Flanking sequence"},"intron":{"class":"ei","label":"#aaaaaa","default":null,"text":"Intron sequence"},"utr":{"default":null,"label":"#cd6839","text":"UTR","class":"eu"},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null}}},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{},"seq":[{"style":[1]}]}}
gtaatattcttaatacctgtgtaat..........ttcatgtataatacggtgttaacag
7 OBART05G09180.1.exon7 7,976,837 7,976,906 2 0 70
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"flanking":{"text":"Flanking sequence","label":"#008000","default":null,"class":"ef"},"intron":{"label":"#aaaaaa","default":null,"text":"Intron sequence","class":"ei"},"utr":{"default":null,"label":"#cd6839","text":"UTR","class":"eu"},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null}}},"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"flourishes":{},"seq":[{"style":[1]},{"style":[1,-9,0]}]},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only"}
CTTTTCGAGTGGTGGTGAAGATGGATATGTAAGACTGCACCATTTTGATTCTGACTACTT CAACATCAAG
Intron 7-8 7,976,907 7,977,589 683
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null},"intron":{"default":null,"label":"#aaaaaa","text":"Intron sequence","class":"ei"},"utr":{"text":"UTR","label":"#cd6839","default":null,"class":"eu"},"exon1":{"default":null,"label":"#1044ee","text":"Translated sequence","class":"e1"}}},"expect":[]}}
gtttaaaccaagttgtgaaactctg..........cagttgttcttcaacttgtatccag
8 OBART05G09180.1.exon8 7,977,590 7,978,015 0 - 426
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"seq":[{"style":[1]},{"style":[1,-29,2]},{"style":[2]},-4,{"style":[2,-5,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"],[7,"cd6839"]]},"flourishes":{},"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"utr":{"default":null,"label":"#cd6839","text":"UTR","class":"eu"},"exon1":{"class":"e1","text":"Translated sequence","label":"#1044ee","default":null}}}}}
GCTGCATTTGAGGAAGGCCGAAGGTGCCTTTTGGTTGGGAAGAGCTGTTTCATCTCCGTT ATGTGGAAGAGACTAAGGTGCAATGTTTAGCTACTGACAGTGTACTGCTTCTCAGACAAT CTTGTTGCACTGGAGATCCAGATTTGTAGATGCTCGAGAGATTTTGTACATTCAGCAATC GAGGGCTCCTTATACTGCAATACTAGCTTAATTATGTTTTCATCGTTGTTGGTTTACTTT GACCATAAATATATCCAGTTTTGGGCATATCCTTCTTCGTCTATACCGTGTTGTGCTTTT GGTTCGCGTTCTAATTACGTGCACATGCTTACTGGGGGTGAAATTTAGGATGTCTCACCG CATGGCAAATTCATTACTTGAAGCAGGCCCGTTTTAAGTGCTGGCAGTAGCAAGTTAAGT TTACCG
3' downstream sequence
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART05G09180;r=50X0P+07972282-7978015;t=OBART05G09180.1;db=core;time=1754892190497.497;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null},"intron":{"text":"Intron sequence","label":"#aaaaaa","default":null,"class":"ei"},"utr":{"class":"eu","text":"UTR","label":"#cd6839","default":null},"exon1":{"class":"e1","default":null,"label":"#1044ee","text":"Translated sequence"}}},"expect":[],"seq":[{"style":[1]}],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#008000"]]}}}
gcatgttcgctcttcatcctgaaactcgtgatcgaatttataattcgaca..........
![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
![[twitter logo]](/i/twitter.png "Follow us on Twitter!")
