Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Export data

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: OBART04G09800.1

.

Location

Chromosome 4: 12,144,889-12,148,630 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 45 domains and features and maps to 34 oligo probes.

Gene

This transcript is a product of gene OBART04G09800 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OBART04G09800.1	2355	784aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3FUX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Exons

.

Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

loadingloaded

▼▲

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........tggccaagcccaacacggcagaggagccacatcacccccgaagccctaaa
1	OBART04G09800.1.exon1	12,148,630	12,148,318	0	1	313	ATGTCCCCCGCCCAGATACCACGCGGCATATCCCCCCTCTCCTCTCCTCTCCTCTCCAAC CCTAGCCGCCCCCAAGCTTCCCNCACCGCCACGACACCTCCTCCTCCTCCTCCTCCCCTC CGCCGGCGGCGCGCACCCCCACCTTCCTCTCCCTTCCCCCCTTCCCCTTCCCCGCGATTC CTGGACGGCGGGGATCCCTCTCCACCGCACCATCTTACCCGCCGAGCAACCACCTCTCGA GCGGGCGCGCGGCGACTCGACGACGAGCAGGACGAGCAGGCGGGAGGGAGGCGGCAGCCA GCCAACCAGGCAG
	Intron 1-2	12,148,317	12,148,144			174	gtgaggatcgcctccgcgtgctgga..........tcttcttcttttctctttgcagcag
2	OBART04G09800.1.exon2	12,148,143	12,148,042	1	1	102	GCCGTGAAATCTTGGGGGAGGAGGAGCAGTTACTGCTCTTCGATCGAGGAAGAAGTCCGC TAATTCCCTCTGCGCGGATTGATCAGGCGATTTCTGTTCAAG
	Intron 2-3	12,148,041	12,146,829			1,213	gtgaggaagctcaagctctatcccc..........tgtctgttgatcacttattctccag
3	OBART04G09800.1.exon3	12,146,828	12,144,889	1	0	1,940	AGATCATTGATGGGGCTCCTTTATATGTCTCATCTAATTGCTTGCCTATAAAAGCATGCA AATATGAACCTGCTGGCCATTCATTCCATGCTGCAGCATTGAAGCTCCTTGGTCTTGGGG AGCAAGAAGATACAGAAACTGATGACCGTAGTGTTTCATCAGATGACAAAGGCCAAGATT TTTCCGCTGCTTCTGATACCTTTAGCAGCAAAGGAAAGAAGAAATCTGGGAGCCAGCAAC AAGATCATTATGCATTGCTTGGCTTGGGGCATTTGCGGTTCTTGGCCACTGAAGACCAGA TCCGGAAGAGTTATCGTGATATGGCTCTTAAACATCATCCTGACAAGCAGGCTTCTCTTA TCCTTGCTGAGGCAACGGAGGAAGCAAAGCAAGCAAAAAAGGATGAGATAGAGAGCCACT TCAAGGCCATTCAAGAAGCCTATGAGGTCCTCATAGATCCCACAAAGAGAAGGATTTTTG ACTCAACTGATGAGTTTGATGATGATATCCCAACGGATTGTGCTCCACAAGATTTCTACA AGGTTTTTGGCCCAGCATTCATGAGAAATGGACGATGGTCTGTTAATCAGACCATTCCTT CTTTAGGAGATGATGCTACTCCTGTAGAAGAAGTTGATAAGTTCTACAATTTCTGGTGGT ACAACTTCAAGAGCTGGAGGGAATTTCCACATGCAGATGAGTATGACTTAGAACAAGCCG AGTCTCGTGAACATAAGAGGTGGATGGAGAGGCAGAATGCAAAACTACAAGAGAAGGCCA AAAAGGTGGAGTATGCGCGAGTACGGACTCTTGTTGACAATGCTTACAAAAAGGATCCAA GAATTCAGCGGTGGAAGGAGGAGGAGAAGGCTGAGAAACAGAGGAGGAAGGAGGCAAAAT ACCTGGCCAAAAAGATGCAAGAGGAGGAAGCTGCAAAGGCTGCAGAAGAGGAAAGGAAGA GGAAAGAAGAGGAAGCAAAGAGAGCTGCAGAGGCTGCTCTCAATCAGAAAAAGTTGAAGG AGAAGGAGAAGAAGCTGCTACGCAAAGAGAAAACCCGTCTGCGCAATCTTGTTGCACCGG TAGTTGCAGAGAGCCGCTTTTCTCTGTCAGAAGATGATGTCGAAACAGCATGCTCGTCAC TTGATATGGAACGACTGAAGAAGCTCTGTGATAGCATGGAGAACAAAGATACAACTGAAA AGGCCAGATTGCTTAGAGGTGCACTGAGCAAAGAAGATTCGTCTGGTACCTCAAATGAAG GAAAGAAAATTCAGGCAAATGGTGTGGATGGTTCCAAAGCAAAATCCACCTCTTCAGGTG AAAAGGTCACGCAAGGCAATACACTAAGCAACTATGAGAAGAAAGAAGAGAAACCATGGG GAAGGGAAGAGATTGAGTTGCTTAGGAAAGCAATACAAAAGTATCCAAAAGGAACCTCCC GGAGATGGGAGGTTGTCTCAGAGTTTATTGGAACTGGAAGATCTGTTGAAGAGATTCTGA AGGCTACGAAGACTGTTCTTTTGCAGAAACCGGACTCTACCAAAGCTTTTGACTCTTTCC TCGAGAAACGCAAGCCGGCACCATCCATTGCATCACCTCTTTCTGTAAGAACTGAAACAG TTGGTTTGCCTACTGAGAAAGCATCTGGAGATGCATCATCCAAAGCGCCTGCACAACCTG CAAGCAGTAAAACATCTGACGAGAAAGCTCCTGCTCCTGCTCCTGTATCAAATGGAACAC CTTCTGGAACAGCAGATCCAGAGGCTTGGTCAGAGGCGCAAGTGCTGGCTCTTGTGCAAG CTTTGAAGGCATTCCCTAAGGATGCAAGCCAAAGATGGGAGCGTGTGGCTGCCGCTGTCC CAGGTAAAACCATGGTGCAGTGCAAGAAAAAGTTTGCAGAGATGCAAAAGAATTTCCGGA GCAAGAAAGGCGCTGAGTAG
	3' downstream sequence						aacaacatagtaccggcgcaagtactttttgtggctagtggctgacaaaa..........

.