5' upstream sequence
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#008000"]]},"legend":{"exons/Introns":{"flanking":{"text":"Flanking sequence","label":"#008000","class":"ef","default":null}},"_messages":[]},"seq":[{"style":[1]}],"flourishes":{},"expect":[]}}
..........caaaccaagccaaccccctcgacggccggaacacatcggggggcgcagcc
1 OBART03G10190.1.exon1 7,022,064 7,022,053 0 0 12
{"provisional":{"flourishes":{},"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"}},"_messages":[]},"seq":[{"style":[1,-11,0]}]},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only"}
ATGGTGCTCGAG
Intron 1-2 7,022,052 7,021,950 103
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"seq":[{"style":[1]}],"legend":{"exons/Introns":{"exon1":{"default":null,"class":"e1","label":"#1044ee","text":"Translated sequence"},"flanking":{"default":null,"class":"ef","label":"#008000","text":"Flanking sequence"},"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"expect":[],"flourishes":{}}}
gttcgccgcgcagctcgccgccctc..........ttttgcgtggctcccctctccgcag
2 OBART03G10190.1.exon2 7,021,949 7,021,836 0 0 114
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"flourishes":{},"expect":[],"seq":[{"style":[1]},{"style":[1,-53,0]}],"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"text":"Flanking sequence","label":"#008000","class":"ef","default":null},"intron":{"default":null,"class":"ei","label":"#aaaaaa","text":"Intron sequence"}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
GCGACGATGATCTGCATAGACAACTCGGAGTGGATGCGGAACGGCGACTACTCGCCGTCG CGATTCCAGGCTCAGGCCGACGCCGTCAACCTCATCTGTGGCGCCAAGACCCAG
Intron 2-3 7,021,835 7,021,731 105
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}],"legend":{"exons/Introns":{"exon1":{"text":"Translated sequence","label":"#1044ee","class":"e1","default":null},"flanking":{"default":null,"class":"ef","label":"#008000","text":"Flanking sequence"},"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"}},"_messages":[]},"expect":[],"flourishes":{}}}
gtacgccaccgtccgacccgatcga..........tttttttttccgggggcctttgcag
3 OBART03G10190.1.exon3 7,021,730 7,021,625 0 1 106
{"provisional":{"flourishes":{},"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},{"style":[1,-45,0]}],"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"default":null,"class":"ef","label":"#008000","text":"Flanking sequence"},"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"}},"_messages":[]}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only"}
TCCAACCCGGAGAACACGGTGGGCGTCATGACGATGGCCGGCAAGGGCGTGCGCGTGCTC GTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG
Intron 3-4 7,021,624 7,021,390 235
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"flourishes":{},"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}],"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"default":null,"class":"ef","label":"#008000","text":"Flanking sequence"},"intron":{"text":"Intron sequence","label":"#aaaaaa","class":"ei","default":null}},"_messages":[]}}}
gtgagttcccatcaaccccatattt..........tgatgtccaacaatgtatgctgcag
4 OBART03G10190.1.exon4 7,021,389 7,021,275 1 2 115
{"provisional":{"flourishes":{},"expect":[],"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"intron":{"default":null,"class":"ei","label":"#aaaaaa","text":"Intron sequence"}},"_messages":[]},"seq":[{"style":[1]},{"style":[1,-54,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only"}
GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCAGCTGGCTC TGAAGCATCGCCAGAATAAGAGGCAGCAACAGCGGATTATAGCTTTTATTGGAAG
Intron 4-5 7,021,274 7,021,197 78
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"flourishes":{},"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"exons/Introns":{"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"},"flanking":{"text":"Flanking sequence","label":"#008000","class":"ef","default":null},"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"}},"_messages":[]},"seq":[{"style":[1]}]}}
gtatgtgggggtgcgtgataacttg..........tgatgacgctggcctaatctttcag
5 OBART03G10190.1.exon5 7,021,196 7,020,987 2 2 210
{"provisional":{"expect":[],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"}},"_messages":[]},"seq":[{"style":[1]},-2,{"style":[1,-29,0]}]},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only"}
CCCTGTGAAATACGACAAGAAAGTTTTGGAAACAATCGGGAAAAAGCTGAAGAAGAATAA TGTGGCTCTTGACATTGTTGACTTTGGTGAAACCGATGATGATAAGCCTGAGAAACTGGA AGCGCTAATCTCTGCTGTGAACAGTAGTGATAGCAGCCACATCGTTCATGTCCCTCCCGG TGAAAATGCCCTTTCCGATGTGCTTATAAG
Intron 5-6 7,020,986 7,020,902 85
{"provisional":{"flourishes":{},"expect":[],"legend":{"exons/Introns":{"exon1":{"text":"Translated sequence","label":"#1044ee","class":"e1","default":null},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"intron":{"text":"Intron sequence","label":"#aaaaaa","class":"ei","default":null}},"_messages":[]},"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only"}
gtataataatgtatcaatttgttag..........caaattaatatccctcttttcacag
6 OBART03G10190.1.exon6 7,020,901 7,020,595 2 0 307
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},-4,{"style":[1,-6,0]}],"legend":{"exons/Introns":{"exon1":{"default":null,"class":"e1","label":"#1044ee","text":"Translated sequence"},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"intron":{"default":null,"class":"ei","label":"#aaaaaa","text":"Intron sequence"}},"_messages":[]},"expect":[],"flourishes":{}}}
TACTCCTATCTTCACTGGTGAAGAAGGTGGAAGCGGTTTTGCTGCTTCTGCAGCAGCAGC AGCAGCTACTGGTGCAGCTGGATTTGAATTTGATGTGGACCCAAATGTAGATCCAGAATT GGCACTCGCCCTGCGGTTGTCCATGGAAGAAGAGCGAGCAAGGCAAGAGGCTATTGCGAA GAAGGCCGCAGAAGAATCTTCTGGTGCTGAAAATAAGGACCATGCCTCAAGCTCAAACAC TGATTCTGTTATGGCAGAAGCAGAACCTGCCTCAAATGCTGCTGATGATAAAAAAGATCA GCCAAAG
Intron 6-7 7,020,594 7,019,708 887
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}],"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"text":"Flanking sequence","label":"#008000","class":"ef","default":null},"intron":{"text":"Intron sequence","label":"#aaaaaa","class":"ei","default":null}},"_messages":[]},"flourishes":{},"expect":[]}}
gtattgtcgttatcctacagttaat..........taatatagatgtgatgtgatcacag
7 OBART03G10190.1.exon7 7,019,707 7,019,581 0 1 127
{"provisional":{"legend":{"exons/Introns":{"exon1":{"default":null,"class":"e1","label":"#1044ee","text":"Translated sequence"},"flanking":{"default":null,"class":"ef","label":"#008000","text":"Flanking sequence"},"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"}},"_messages":[]},"seq":[{"style":[1]},-1,{"style":[1,-6,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"expect":[],"flourishes":{}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only"}
GAAGATGATGATGCTCAGCTACTACAACAGGCTCTTGCAATGTCAATGGAGGAGGGTTCT TCAGGGGCTGCAGCGGCTGATGCTGCTATGGCAGAGGCTGCTGTAGATGACCAGGACTTG GCACTAG
Intron 7-8 7,019,580 7,019,344 237
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"flourishes":{},"expect":[],"seq":[{"style":[1]}],"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"default":null,"class":"ef","label":"#008000","text":"Flanking sequence"},"intron":{"text":"Intron sequence","label":"#aaaaaa","class":"ei","default":null}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gtaggtccttttctctgctgagctc..........tttaaccaatttgatttctgcgcag
8 OBART03G10190.1.exon8 7,019,343 7,019,246 1 0 98
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},{"style":[1,-37,0]}],"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"default":null,"class":"ef","label":"#008000","text":"Flanking sequence"},"intron":{"text":"Intron sequence","label":"#aaaaaa","class":"ei","default":null}},"_messages":[]},"flourishes":{},"expect":[]}}
CTCTTCAAATGTCTGTCCAGGACGCAGGCGGGTCTAGTCAGTCTGATATGAGCAAGGTGT TTGAAGACAGATCATTTGTTACATCCATCCTTAACTCT
Intron 8-9 7,019,245 7,019,153 93
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"expect":[],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}],"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"default":null,"class":"ef","label":"#008000","text":"Flanking sequence"},"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"}},"_messages":[]}}}
gtaagtatttgtttagaaccaatga..........gctcttttcccccttcaaattatag
9 OBART03G10190.1.exon9 7,019,152 7,019,084 0 0 69
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"intron":{"text":"Intron sequence","label":"#aaaaaa","class":"ei","default":null}},"_messages":[]},"seq":[{"style":[1]},{"style":[1,-8,0]}],"expect":[],"flourishes":{}}}
CTCCCTGGTGTTGACCCCAATGACCCCTCTGTGAAAGATTTGCTGGCATCATTGCATGGG CAGGGCGAG
Intron 9-10 7,019,083 7,018,501 583
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"flourishes":{},"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"}},"_messages":[]},"seq":[{"style":[1]}]}}
gtatgcttttctctatccttttaga..........ctatgtacgctcttcttcctgacag
10 OBART03G10190.1.exon10 7,018,500 7,018,450 0 0 51
{"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only","provisional":{"legend":{"exons/Introns":{"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"}},"_messages":[]},"seq":[{"style":[1,-50,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"flourishes":{},"expect":[]}}
CAAGAGAAGAAGGAAGACAAATCAGACAAGCCAGAAGATGAGAAGAAATAA
3' downstream sequence
{"provisional":{"expect":[],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#008000"]]},"seq":[{"style":[1]}],"legend":{"exons/Introns":{"exon1":{"default":null,"class":"e1","label":"#1044ee","text":"Translated sequence"},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"intron":{"default":null,"class":"ei","label":"#aaaaaa","text":"Intron sequence"}},"_messages":[]}},"url":"/Oryza_barthii/Component/Transcript/Exons/exons?g=OBART03G10190;r=30X0P+07018450-7022064;t=OBART03G10190.1;db=core;time=1743470802600.6;adorn=only"}
atcaactcctttgtgtcttccttgtaagatttcagtatgctgtcttacct..........
Oryza barthii (O.barthii_v1) ▼ 
Summary
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