Oryza barthii (O.barthii_v1)
Location
About this transcript

This transcript has 3 exons, is annotated with 11 domains and features and maps to 30 oligo probes.

Gene
Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-OBART02G36030.1960179aa
 
Protein coding
A0A0D3FBM6 Ensembl Canonical
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
  • UTR
Markup
  • loading
Show/hide columns
  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........ataacaaaagttaaaattcggtagaaattcctctcacgtggggccacagg
1OBART02G36030.1.exon129,996,07129,996,649-0579
AATCACATAAAAACATACTGATATATCCTATATCCATCAGCCTACAGGCAGCTATGTATA
GAGGTAGCTGAGCAATTGGCATGGCCATGCGTTAGAGAGAGAGAGAGAGAGTGCATGAGC
ATGATGAGCTCTCCTTCTCCCTCTCCTTAATTTAGACATAAACTTAATTAGCTATGCCGC
TCCTCTCTCTAATCTCCCCTCCAAAGATTATGGTTGGTAGGAGATGGATGAGTTCCTGAT
CATCTTCTTGCTCTAAAATGGAAGGTTTCCAATGGATTCCAGCTTCTGAATCTTGCAGCT
AGGTAGGTAGGTAGGTCGGTAGCTGGTAGCTTAGCTAGGCAGTCAGGCAGATGGTGTGTT
GTTGCTTCTGCTGTGATCGCTCGCATACGTAGATAAGGTTAGAGGTTGATCGCTCGGTAG
ATGGTACTGATGGCCGGGATGCTTCCCGGAGTGGAGTGCGCGCGGCGGCGACGTCTCCGG
CAGGGCGGCGGGGAGGCGCCGTGCGGGACGCGGCGGCCGTCGTTGTGCCTGTACGCCGGC
GGCCACGACCACGCCCTCCTTGGCTCCTCCGCTTCTAAG                     
 Intron 1-229,996,65029,996,767118
gtagagatttcgagatcatgaacta..........atttggaattggaattatgttgcag
2OBART02G36030.1.exon229,996,76829,996,8240057
CAGCAGAGGAGCGCGTGCGAGGAGCAGCAGCCCGGGTGGTGGACGCTGGACAGCAAC   
 Intron 2-329,996,82529,997,191367
gtgcgggaggcgaaggagaggctgg..........tgcatgcaggcataacaaagcgcag
3OBART02G36030.1.exon329,997,19229,997,51500324
GTGGCAGGAACGAGCAGCGACGGCGGCGAGCAGTCAACGGCAACTACGGCGGCGCCGCAG
TGGGAGGTGTACACGAGGAAAGAAGGGCGGCGGCGGATGTGGTTCAGGAGGTTGGGGCGG
AGGCCGACGCCGGAGGAGGAGGAGTGCGCGGTGTGTCTGGAGGAGCTGCGTGCCGGGGAG
GCGGTGGCGCACCTCCCCTGCACGCACCGCTTCCACTGGGGCTGCGCCGTGCCATGGGTC
CAGACCGCCTCCCGCTGCCCCGTCTGTCGCGCCGCCGTCTACCTCACCACACCGGCGCCG
GCGGCCAGCAACAACTACAACTAG                                    
3' downstream sequence
ctagacggaagcggatcctccaacgtaaacttcctcctgacacggttact..........