Oryza barthii (O.barthii_v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 9: 5,240,917-5,244,057 forward strand.
This transcript has 3 exons, is annotated with 18 domains and features and maps to 34 oligo probes.
This transcript is a product of gene OBART09G04230 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| SMART | 4 | 147 | - | SM00212 | - |
| PANTHER | 26 | 146 | - | PTHR24068 | - |
| PROSITE profiles | 1 | 147 | Ubiquitin-conjugating enzyme E2 | PS50127 | IPR000608 [Display all genes with this domain] |
| CDD | 3 | 142 | Ubiquitin-conjugating enzyme E2 | cd00195 | IPR000608 [Display all genes with this domain] |
| Pfam | 5 | 141 | Ubiquitin-conjugating enzyme E2 | PF00179 | IPR000608 [Display all genes with this domain] |
| PROSITE patterns | 74 | 89 | Ubiquitin-conjugating enzyme, active site | PS00183 | IPR023313 [Display all genes with this domain] |
| Gene3D | 1 | 148 | Ubiquitin-conjugating enzyme/RWD-like | 3.10.110.10 | IPR016135 [Display all genes with this domain] |
| Superfamily | 2 | 147 | Ubiquitin-conjugating enzyme/RWD-like | SSF54495 | IPR016135 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Seg | 97 | 111 |
| Alphafold | 1 | 148 |
| Alphafold | 1 | 148 |
| Alphafold | 1 | 148 |
| Alphafold | 1 | 148 |
| Alphafold | 1 | 148 |
| Alphafold | 1 | 148 |
| Alphafold | 1 | 148 |
| Alphafold | 1 | 148 |
| Alphafold | 1 | 148 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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