Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OBART08G15840.2

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Location

Chromosome 8: 16,220,432-16,222,938 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features and maps to 27 oligo probes.

Gene

This transcript is a product of gene OBART08G15840 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OBART08G15840.1	942	313aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3H0M1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OBART08G15840.2	867	288aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3H0M2	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	58	111	-	SSF57850	-
CDD	61	107	-	cd16495	-
PANTHER	1	210	E3 ubiquitin-protein ligase MARCH-like	PTHR23012	IPR033275 [Display all genes with this domain]
Pfam	130	210	Protein of unknown function DUF3675	PF12428	IPR022143 [Display all genes with this domain]
PROSITE profiles	53	113	Zinc finger, RING-CH-type	PS51292	IPR011016 [Display all genes with this domain]
SMART	60	107	Zinc finger, RING-CH-type	SM00744	IPR011016 [Display all genes with this domain]
Pfam	61	106	Zinc finger, RING-CH-type	PF12906	IPR011016 [Display all genes with this domain]
Gene3D	47	115	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
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Filter

Feature type	Start	End
Seg	31	43
Seg	126	131
Seg	250	255
Alphafold	1	288

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