Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OBART08G11650.1

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Location

Chromosome 8: 11,760,894-11,765,765 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features and maps to 42 oligo probes.

Gene

This transcript is a product of gene OBART08G11650 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OBART08G11650.1	1586	361aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3GZA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	3	235	-	cd09991	-
PIRSF	4	361	Histone deacetylase	PIRSF037913	IPR003084 [Display all genes with this domain]
Prints	10	27	Histone deacetylase	PR01271	IPR003084 [Display all genes with this domain]
Prints	31	51	Histone deacetylase	PR01271	IPR003084 [Display all genes with this domain]
Prints	72	88	Histone deacetylase	PR01271	IPR003084 [Display all genes with this domain]
Prints	131	144	Histone deacetylase	PR01271	IPR003084 [Display all genes with this domain]
Prints	148	166	Histone deacetylase	PR01271	IPR003084 [Display all genes with this domain]
PANTHER	9	298	Histone deacetylase and polyamine deacetylase	PTHR10625	IPR050284 [Display all genes with this domain]
Pfam	13	233	Histone deacetylase domain	PF00850	IPR023801 [Display all genes with this domain]
Gene3D	3	302	Histone deacetylase domain superfamily	3.40.800.20	IPR037138 [Display all genes with this domain]
Prints	53	76	Histone deacetylase family	PR01270	IPR000286 [Display all genes with this domain]
Prints	85	100	Histone deacetylase family	PR01270	IPR000286 [Display all genes with this domain]
Prints	170	180	Histone deacetylase family	PR01270	IPR000286 [Display all genes with this domain]
Superfamily	7	288	Ureohydrolase domain superfamily	SSF52768	IPR023696 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	292	303
MobiDBLite	292	361
Alphafold	1	361

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