Oryza barthii (O.barthii_v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 5: 17,916,162-17,920,671 forward strand.
This transcript has 6 exons, is annotated with 19 domains and features and maps to 42 oligo probes.
This transcript is a product of gene OBART05G19260 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| SMART | 10 | 167 | - | SM00212 | - |
| PANTHER | 6 | 166 | Ubiquitin-conjugating enzyme | PTHR24067 | IPR050113 [Display all genes with this domain] |
| PROSITE profiles | 7 | 167 | Ubiquitin-conjugating enzyme E2 | PS50127 | IPR000608 [Display all genes with this domain] |
| Pfam | 12 | 161 | Ubiquitin-conjugating enzyme E2 | PF00179 | IPR000608 [Display all genes with this domain] |
| CDD | 21 | 162 | Ubiquitin-conjugating enzyme E2 | cd00195 | IPR000608 [Display all genes with this domain] |
| PROSITE patterns | 81 | 96 | Ubiquitin-conjugating enzyme, active site | PS00183 | IPR023313 [Display all genes with this domain] |
| Gene3D | 4 | 169 | Ubiquitin-conjugating enzyme/RWD-like | 3.10.110.10 | IPR016135 [Display all genes with this domain] |
| Superfamily | 6 | 165 | Ubiquitin-conjugating enzyme/RWD-like | SSF54495 | IPR016135 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Seg | 2 | 21 |
| Seg | 121 | 132 |
| Alphafold | 1 | 169 |
| Alphafold | 1 | 169 |
| Alphafold | 1 | 169 |
| Alphafold | 1 | 169 |
| Alphafold | 1 | 169 |
| Alphafold | 1 | 169 |
| Alphafold | 1 | 169 |
| Alphafold | 1 | 169 |
| Alphafold | 1 | 169 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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