Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OBART05G15590.1

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Description

ARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:Projected from Arabidopsis thaliana (AT5G19330) UniProtKB/Swiss-Prot;Acc:B9DHT4]

Location

Chromosome 5: 15,085,483-15,093,748 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 18 domains and features and maps to 77 oligo probes.

Gene

This transcript is a product of gene OBART05G15590 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OBART05G15590.2	2121	467aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3G7C9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OBART05G15590.1	2100	460aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3G7C8	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	281	396	-	cd18352	-
SMART	24	64	Armadillo	SM00185	IPR000225 [Display all genes with this domain]
Pfam	66	105	Armadillo	PF00514	IPR000225 [Display all genes with this domain]
SMART	66	106	Armadillo	SM00185	IPR000225 [Display all genes with this domain]
PROSITE profiles	77	119	Armadillo	PS50176	IPR000225 [Display all genes with this domain]
SMART	107	147	Armadillo	SM00185	IPR000225 [Display all genes with this domain]
SMART	222	262	Armadillo	SM00185	IPR000225 [Display all genes with this domain]
PANTHER	1	455	Armadillo repeat protein ABAP1/ARIA	PTHR46710	IPR044282 [Display all genes with this domain]
Gene3D	1	270	Armadillo-like helical	1.25.10.10	IPR011989 [Display all genes with this domain]
Superfamily	1	261	Armadillo-type fold	SSF48371	IPR016024 [Display all genes with this domain]
Pfam	289	389	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	294	361	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	294	391	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
Gene3D	285	430	SKP1/BTB/POZ domain superfamily	3.30.710.10	IPR011333 [Display all genes with this domain]
Superfamily	286	388	SKP1/BTB/POZ domain superfamily	SSF54695	IPR011333 [Display all genes with this domain]

Other features

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Start
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Feature type	Start	End
Seg	235	247
Seg	256	267
Alphafold	1	460

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