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    Oryza barthii (O.barthii_v1) ▼

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    Transcript: OBART04G12280.1

    Location

    Chromosome 4: 14,307,622-14,310,551 reverse strand.

    About this transcript

    This transcript has 7 exons, is annotated with 31 domains and features and maps to 47 oligo probes.

    Gene

    This transcript is a product of gene OBART04G12280 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -OBART04G12280.12043680aa
     
    Protein coding
    		A0A0D3FVR3 Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    PROSITE profiles251284-PS50294-
    PROSITE profiles339371-PS50294-
    PROSITE profiles379412-PS50294-
    Prints270284G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints357371G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints399413G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    PANTHER5677WD repeat-containing protein WDR44/Dgr2PTHR14221IPR040324 [Display all genes with this domain]
    SMART244283WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam249282WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles251292WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART332370WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam334369WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles339371WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART373412WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam379412WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles379412WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART414453WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART504545WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam524545WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles524547WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Superfamily247669WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D235576WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite584612
    MobiDBLite591601
    Seg718
    Seg99118
    Seg186197
    Seg482500
    Seg591601
    Alphafold1680
    Alphafold1680

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