Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OBART03G33390.1

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Description

ubiquitin-protein ligases [Source:Projected from Arabidopsis thaliana (AT2G39810) TAIR;Acc:AT2G39810]

Location

Chromosome 3: 27,731,826-27,739,709 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features and maps to 56 oligo probes.

Gene

This transcript is a product of gene OBART03G33390 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OBART03G33390.1	2978	894aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3FNS6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	168	894	E3 ubiquitin-protein ligase HOS1	PTHR47358	IPR044718 [Display all genes with this domain]
Pfam	271	530	ELYS-like domain	PF13934	IPR025151 [Display all genes with this domain]
Gene3D	22	81	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	838	894
MobiDBLite	885	894
Seg	861	870
Seg	886	894
Alphafold	1	894

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