Oryza barthii (O.barthii_v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 2: 29,617,435-29,618,631 reverse strand.
This transcript has 1 exon, is annotated with 16 domains and features and maps to 48 oligo probes.
This transcript is a product of gene OBART02G35430 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| PANTHER | 29 | 330 | - | PTHR45768 | - |
| Superfamily | 98 | 171 | - | SSF57850 | - |
| CDD | 122 | 165 | - | cd16461 | - |
| Pfam | 122 | 165 | Zinc finger, RING-type | PF13639 | IPR001841 [Display all genes with this domain] |
| SMART | 123 | 164 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 123 | 165 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 81 | 170 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 285 | 307 |
| Seg | 4 | 22 |
| Seg | 35 | 48 |
| Seg | 51 | 69 |
| Seg | 247 | 260 |
| Seg | 285 | 301 |
| Seg | 303 | 315 |
| TMHMM | 34 | 56 |
| Alphafold | 1 | 398 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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