Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OBART02G20890.1

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Location

Chromosome 2: 19,002,396-19,005,904 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features and maps to 37 oligo probes.

Gene

This transcript is a product of gene OBART02G20890 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OBART02G20890.1	1621	268aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D3F6I7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	26	267	Alfin	PTHR12321	IPR045104 [Display all genes with this domain]
Pfam	30	156	Alfin, N-terminal	PF12165	IPR021998 [Display all genes with this domain]
CDD	215	264	Alfin1-like, PHD finger	cd15613	IPR044104 [Display all genes with this domain]
Superfamily	205	265	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	212	264	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
Pfam	215	261	Zinc finger, PHD-finger	PF00628	IPR019787 [Display all genes with this domain]
SMART	214	262	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
PROSITE patterns	215	261	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
Gene3D	203	263	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	163	208
MobiDBLite	166	189
MobiDBLite	197	208
Seg	4	22
Seg	80	94
Seg	166	196
Alphafold	1	268
Alphafold	1	268
Alphafold	1	268

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