Location-based displays
Whole genome- Chromosome summary
- Region overview
- Region in detail
Comparative Genomics- Genetic Variation
- Variant table
- Resequencing
- Linkage Data
- Markers
.
Chromosome 12: 18,309,452-18,309,700
.
.
Loading component
Add/remove tracksCustom tracksShareResize imageExport imageReset configurationReset track order
Drag/Select:
☰
[["rect",[150,38,154,48],{"title":"A; Position: 12:18309452"}],["rect",[153,38,157,48],{"title":"C; Position: 12:18309453"}],["rect",[156,38,161,48],{"title":"A; Position: 12:18309454"}],["rect",[160,38,164,48],{"title":"A; Position: 12:18309455"}],["rect",[163,38,167,48],{"title":"G; Position: 12:18309456"}],["rect",[166,38,171,48],{"title":"A; Position: 12:18309457"}],["rect",[170,38,174,48],{"title":"A; Position: 12:18309458"}],["rect",[173,38,178,48],{"title":"T; Position: 12:18309459"}],["rect",[177,38,181,48],{"title":"C; Position: 12:18309460"}],["rect",[180,38,184,48],{"title":"A; Position: 12:18309461"}],["rect",[183,38,188,48],{"title":"G; Position: 12:18309462"}],["rect",[187,38,191,48],{"title":"C; Position: 12:18309463"}],["rect",[190,38,195,48],{"title":"A; Position: 12:18309464"}],["rect",[194,38,198,48],{"title":"C; Position: 12:18309465"}],["rect",[197,38,201,48],{"title":"C; Position: 12:18309466"}],["rect",[200,38,205,48],{"title":"A; Position: 12:18309467"}],["rect",[204,38,208,48],{"title":"T; Position: 12:18309468"}],["rect",[207,38,212,48],{"title":"G; Position: 12:18309469"}],["rect",[211,38,215,48],{"title":"T; Position: 12:18309470"}],["rect",[214,38,218,48],{"title":"T; Position: 12:18309471"}],["rect",[217,38,222,48],{"title":"A; Position: 12:18309472"}],["rect",[221,38,225,48],{"title":"A; Position: 12:18309473"}],["rect",[224,38,229,48],{"title":"T; Position: 12:18309474"}],["rect",[228,38,232,48],{"title":"T; Position: 12:18309475"}],["rect",[231,38,235,48],{"title":"T; Position: 12:18309476"}],["rect",[234,38,239,48],{"title":"A; Position: 12:18309477"}],["rect",[238,38,242,48],{"title":"A; Position: 12:18309478"}],["rect",[241,38,246,48],{"title":"A; Position: 12:18309479"}],["rect",[245,38,249,48],{"title":"G; Position: 12:18309480"}],["rect",[248,38,252,48],{"title":"A; Position: 12:18309481"}],["rect",[251,38,256,48],{"title":"T; Position: 12:18309482"}],["rect",[255,38,259,48],{"title":"T; Position: 12:18309483"}],["rect",[258,38,262,48],{"title":"A; Position: 12:18309484"}],["rect",[261,38,266,48],{"title":"T; Position: 12:18309485"}],["rect",[265,38,269,48],{"title":"A; Position: 12:18309486"}],["rect",[268,38,273,48],{"title":"A; Position: 12:18309487"}],["rect",[272,38,276,48],{"title":"T; Position: 12:18309488"}],["rect",[275,38,279,48],{"title":"T; Position: 12:18309489"}],["rect",[278,38,283,48],{"title":"C; Position: 12:18309490"}],["rect",[282,38,286,48],{"title":"C; Position: 12:18309491"}],["rect",[285,38,290,48],{"title":"A; Position: 12:18309492"}],["rect",[289,38,293,48],{"title":"T; Position: 12:18309493"}],["rect",[292,38,296,48],{"title":"A; Position: 12:18309494"}],["rect",[295,38,300,48],{"title":"C; Position: 12:18309495"}],["rect",[299,38,303,48],{"title":"A; Position: 12:18309496"}],["rect",[302,38,307,48],{"title":"T; Position: 12:18309497"}],["rect",[306,38,310,48],{"title":"A; Position: 12:18309498"}],["rect",[309,38,313,48],{"title":"C; Position: 12:18309499"}],["rect",[312,38,317,48],{"title":"A; Position: 12:18309500"}],["rect",[316,38,320,48],{"title":"A; Position: 12:18309501"}],["rect",[319,38,324,48],{"title":"G; Position: 12:18309502"}],["rect",[323,38,327,48],{"title":"A; Position: 12:18309503"}],["rect",[326,38,330,48],{"title":"A; Position: 12:18309504"}],["rect",[329,38,334,48],{"title":"T; Position: 12:18309505"}],["rect",[333,38,337,48],{"title":"C; Position: 12:18309506"}],["rect",[336,38,341,48],{"title":"A; Position: 12:18309507"}],["rect",[340,38,344,48],{"title":"G; Position: 12:18309508"}],["rect",[343,38,347,48],{"title":"A; Position: 12:18309509"}],["rect",[346,38,351,48],{"title":"A; Position: 12:18309510"}],["rect",[350,38,354,48],{"title":"T; Position: 12:18309511"}],["rect",[353,38,358,48],{"title":"C; Position: 12:18309512"}],["rect",[357,38,361,48],{"title":"A; Position: 12:18309513"}],["rect",[360,38,364,48],{"title":"G; Position: 12:18309514"}],["rect",[363,38,368,48],{"title":"G; Position: 12:18309515"}],["rect",[367,38,371,48],{"title":"C; Position: 12:18309516"}],["rect",[370,38,374,48],{"title":"A; Position: 12:18309517"}],["rect",[373,38,378,48],{"title":"G; Position: 12:18309518"}],["rect",[377,38,381,48],{"title":"A; Position: 12:18309519"}],["rect",[380,38,385,48],{"title":"C; Position: 12:18309520"}],["rect",[384,38,388,48],{"title":"C; Position: 12:18309521"}],["rect",[387,38,391,48],{"title":"T; Position: 12:18309522"}],["rect",[390,38,395,48],{"title":"C; Position: 12:18309523"}],["rect",[394,38,398,48],{"title":"T; Position: 12:18309524"}],["rect",[397,38,402,48],{"title":"T; Position: 12:18309525"}],["rect",[401,38,405,48],{"title":"G; Position: 12:18309526"}],["rect",[404,38,408,48],{"title":"C; Position: 12:18309527"}],["rect",[407,38,412,48],{"title":"A; Position: 12:18309528"}],["rect",[411,38,415,48],{"title":"T; Position: 12:18309529"}],["rect",[414,38,419,48],{"title":"C; Position: 12:18309530"}],["rect",[418,38,422,48],{"title":"T; Position: 12:18309531"}],["rect",[421,38,425,48],{"title":"C; Position: 12:18309532"}],["rect",[424,38,429,48],{"title":"A; Position: 12:18309533"}],["rect",[428,38,432,48],{"title":"C; Position: 12:18309534"}],["rect",[431,38,436,48],{"title":"C; Position: 12:18309535"}],["rect",[435,38,439,48],{"title":"C; Position: 12:18309536"}],["rect",[438,38,442,48],{"title":"T; Position: 12:18309537"}],["rect",[441,38,446,48],{"title":"A; Position: 12:18309538"}],["rect",[445,38,449,48],{"title":"C; Position: 12:18309539"}],["rect",[448,38,453,48],{"title":"T; Position: 12:18309540"}],["rect",[452,38,456,48],{"title":"T; Position: 12:18309541"}],["rect",[455,38,459,48],{"title":"G; Position: 12:18309542"}],["rect",[458,38,463,48],{"title":"T; Position: 12:18309543"}],["rect",[462,38,466,48],{"title":"A; Position: 12:18309544"}],["rect",[465,38,469,48],{"title":"A; Position: 12:18309545"}],["rect",[468,38,473,48],{"title":"A; Position: 12:18309546"}],["rect",[472,38,476,48],{"title":"C; Position: 12:18309547"}],["rect",[475,38,480,48],{"title":"A; Position: 12:18309548"}],["rect",[479,38,483,48],{"title":"A; Position: 12:18309549"}],["rect",[482,38,486,48],{"title":"C; Position: 12:18309550"}],["rect",[485,38,490,48],{"title":"T; Position: 12:18309551"}],["rect",[489,38,493,48],{"title":"A; Position: 12:18309552"}],["rect",[492,38,497,48],{"title":"A; Position: 12:18309553"}],["rect",[496,38,500,48],{"title":"A; Position: 12:18309554"}],["rect",[499,38,503,48],{"title":"C; Position: 12:18309555"}],["rect",[502,38,507,48],{"title":"A; Position: 12:18309556"}],["rect",[506,38,510,48],{"title":"A; Position: 12:18309557"}],["rect",[509,38,514,48],{"title":"C; Position: 12:18309558"}],["rect",[513,38,517,48],{"title":"C; Position: 12:18309559"}],["rect",[516,38,520,48],{"title":"A; Position: 12:18309560"}],["rect",[519,38,524,48],{"title":"T; Position: 12:18309561"}],["rect",[523,38,527,48],{"title":"A; Position: 12:18309562"}],["rect",[526,38,531,48],{"title":"C; Position: 12:18309563"}],["rect",[530,38,534,48],{"title":"A; Position: 12:18309564"}],["rect",[533,38,537,48],{"title":"A; Position: 12:18309565"}],["rect",[536,38,541,48],{"title":"G; Position: 12:18309566"}],["rect",[540,38,544,48],{"title":"C; Position: 12:18309567"}],["rect",[543,38,548,48],{"title":"C; Position: 12:18309568"}],["rect",[547,38,551,48],{"title":"G; Position: 12:18309569"}],["rect",[550,38,554,48],{"title":"A; Position: 12:18309570"}],["rect",[553,38,558,48],{"title":"T; Position: 12:18309571"}],["rect",[557,38,561,48],{"title":"G; Position: 12:18309572"}],["rect",[560,38,565,48],{"title":"A; Position: 12:18309573"}],["rect",[564,38,568,48],{"title":"T; Position: 12:18309574"}],["rect",[567,38,571,48],{"title":"C; Position: 12:18309575"}],["rect",[570,38,575,48],{"title":"T; Position: 12:18309576"}],["rect",[574,38,578,48],{"title":"T; Position: 12:18309577"}],["rect",[577,38,581,48],{"title":"G; Position: 12:18309578"}],["rect",[580,38,585,48],{"title":"C; Position: 12:18309579"}],["rect",[584,38,588,48],{"title":"T; Position: 12:18309580"}],["rect",[587,38,592,48],{"title":"A; Position: 12:18309581"}],["rect",[591,38,595,48],{"title":"G; Position: 12:18309582"}],["rect",[594,38,598,48],{"title":"G; Position: 12:18309583"}],["rect",[597,38,602,48],{"title":"C; Position: 12:18309584"}],["rect",[601,38,605,48],{"title":"A; Position: 12:18309585"}],["rect",[604,38,609,48],{"title":"A; Position: 12:18309586"}],["rect",[608,38,612,48],{"title":"C; Position: 12:18309587"}],["rect",[611,38,615,48],{"title":"A; Position: 12:18309588"}],["rect",[614,38,619,48],{"title":"A; Position: 12:18309589"}],["rect",[618,38,622,48],{"title":"A; Position: 12:18309590"}],["rect",[621,38,626,48],{"title":"A; Position: 12:18309591"}],["rect",[625,38,629,48],{"title":"G; Position: 12:18309592"}],["rect",[628,38,632,48],{"title":"G; Position: 12:18309593"}],["rect",[631,38,636,48],{"title":"G; Position: 12:18309594"}],["rect",[635,38,639,48],{"title":"G; Position: 12:18309595"}],["rect",[638,38,643,48],{"title":"A; Position: 12:18309596"}],["rect",[642,38,646,48],{"title":"A; Position: 12:18309597"}],["rect",[645,38,649,48],{"title":"A; Position: 12:18309598"}],["rect",[648,38,653,48],{"title":"A; Position: 12:18309599"}],["rect",[652,38,656,48],{"title":"A; Position: 12:18309600"}],["rect",[655,38,660,48],{"title":"A; Position: 12:18309601"}],["rect",[659,38,663,48],{"title":"T; Position: 12:18309602"}],["rect",[662,38,666,48],{"title":"G; Position: 12:18309603"}],["rect",[665,38,670,48],{"title":"A; Position: 12:18309604"}],["rect",[669,38,673,48],{"title":"G; Position: 12:18309605"}],["rect",[672,38,677,48],{"title":"A; Position: 12:18309606"}],["rect",[676,38,680,48],{"title":"A; Position: 12:18309607"}],["rect",[679,38,683,48],{"title":"A; Position: 12:18309608"}],["rect",[682,38,687,48],{"title":"A; Position: 12:18309609"}],["rect",[686,38,690,48],{"title":"C; Position: 12:18309610"}],["rect",[689,38,693,48],{"title":"T; Position: 12:18309611"}],["rect",[692,38,697,48],{"title":"C; Position: 12:18309612"}],["rect",[696,38,700,48],{"title":"T; Position: 12:18309613"}],["rect",[699,38,704,48],{"title":"A; Position: 12:18309614"}],["rect",[703,38,707,48],{"title":"A; Position: 12:18309615"}],["rect",[706,38,710,48],{"title":"A; Position: 12:18309616"}],["rect",[709,38,714,48],{"title":"A; Position: 12:18309617"}],["rect",[713,38,717,48],{"title":"G; Position: 12:18309618"}],["rect",[716,38,721,48],{"title":"G; Position: 12:18309619"}],["rect",[720,38,724,48],{"title":"A; Position: 12:18309620"}],["rect",[723,38,727,48],{"title":"A; Position: 12:18309621"}],["rect",[726,38,731,48],{"title":"A; Position: 12:18309622"}],["rect",[730,38,734,48],{"title":"A; Position: 12:18309623"}],["rect",[733,38,738,48],{"title":"A; Position: 12:18309624"}],["rect",[737,38,741,48],{"title":"A; Position: 12:18309625"}],["rect",[740,38,744,48],{"title":"G; Position: 12:18309626"}],["rect",[743,38,748,48],{"title":"G; Position: 12:18309627"}],["rect",[747,38,751,48],{"title":"T; Position: 12:18309628"}],["rect",[750,38,755,48],{"title":"T; Position: 12:18309629"}],["rect",[754,38,758,48],{"title":"G; Position: 12:18309630"}],["rect",[757,38,761,48],{"title":"C; Position: 12:18309631"}],["rect",[760,38,765,48],{"title":"T; Position: 12:18309632"}],["rect",[764,38,768,48],{"title":"G; Position: 12:18309633"}],["rect",[767,38,772,48],{"title":"G; Position: 12:18309634"}],["rect",[771,38,775,48],{"title":"G; Position: 12:18309635"}],["rect",[774,38,778,48],{"title":"A; Position: 12:18309636"}],["rect",[777,38,782,48],{"title":"G; Position: 12:18309637"}],["rect",[781,38,785,48],{"title":"A; Position: 12:18309638"}],["rect",[784,38,788,48],{"title":"G; Position: 12:18309639"}],["rect",[787,38,792,48],{"title":"C; Position: 12:18309640"}],["rect",[791,38,795,48],{"title":"A; Position: 12:18309641"}],["rect",[794,38,799,48],{"title":"A; Position: 12:18309642"}],["rect",[798,38,802,48],{"title":"A; Position: 12:18309643"}],["rect",[801,38,805,48],{"title":"T; Position: 12:18309644"}],["rect",[804,38,809,48],{"title":"G; Position: 12:18309645"}],["rect",[808,38,812,48],{"title":"C; Position: 12:18309646"}],["rect",[811,38,816,48],{"title":"A; Position: 12:18309647"}],["rect",[815,38,819,48],{"title":"T; Position: 12:18309648"}],["rect",[818,38,822,48],{"title":"T; Position: 12:18309649"}],["rect",[821,38,826,48],{"title":"C; Position: 12:18309650"}],["rect",[825,38,829,48],{"title":"A; Position: 12:18309651"}],["rect",[828,38,833,48],{"title":"C; Position: 12:18309652"}],["rect",[832,38,836,48],{"title":"A; Position: 12:18309653"}],["rect",[835,38,839,48],{"title":"G; Position: 12:18309654"}],["rect",[838,38,843,48],{"title":"C; Position: 12:18309655"}],["rect",[842,38,846,48],{"title":"T; Position: 12:18309656"}],["rect",[845,38,850,48],{"title":"A; Position: 12:18309657"}],["rect",[849,38,853,48],{"title":"T; Position: 12:18309658"}],["rect",[852,38,856,48],{"title":"T; Position: 12:18309659"}],["rect",[855,38,860,48],{"title":"T; Position: 12:18309660"}],["rect",[859,38,863,48],{"title":"A; Position: 12:18309661"}],["rect",[862,38,867,48],{"title":"C; Position: 12:18309662"}],["rect",[866,38,870,48],{"title":"A; Position: 12:18309663"}],["rect",[869,38,873,48],{"title":"C; Position: 12:18309664"}],["rect",[872,38,877,48],{"title":"C; Position: 12:18309665"}],["rect",[876,38,880,48],{"title":"T; Position: 12:18309666"}],["rect",[879,38,884,48],{"title":"C; Position: 12:18309667"}],["rect",[883,38,887,48],{"title":"A; Position: 12:18309668"}],["rect",[886,38,890,48],{"title":"A; Position: 12:18309669"}],["rect",[889,38,894,48],{"title":"A; Position: 12:18309670"}],["rect",[893,38,897,48],{"title":"A; Position: 12:18309671"}],["rect",[896,38,900,48],{"title":"G; Position: 12:18309672"}],["rect",[899,38,904,48],{"title":"C; Position: 12:18309673"}],["rect",[903,38,907,48],{"title":"A; Position: 12:18309674"}],["rect",[906,38,911,48],{"title":"A; Position: 12:18309675"}],["rect",[910,38,914,48],{"title":"A; Position: 12:18309676"}],["rect",[913,38,917,48],{"title":"T; Position: 12:18309677"}],["rect",[916,38,921,48],{"title":"G; Position: 12:18309678"}],["rect",[920,38,924,48],{"title":"T; Position: 12:18309679"}],["rect",[923,38,928,48],{"title":"T; Position: 12:18309680"}],["rect",[927,38,931,48],{"title":"G; Position: 12:18309681"}],["rect",[930,38,934,48],{"title":"T; Position: 12:18309682"}],["rect",[933,38,938,48],{"title":"T; Position: 12:18309683"}],["rect",[937,38,941,48],{"title":"G; Position: 12:18309684"}],["rect",[940,38,945,48],{"title":"A; Position: 12:18309685"}],["rect",[944,38,948,48],{"title":"G; Position: 12:18309686"}],["rect",[947,38,951,48],{"title":"G; Position: 12:18309687"}],["rect",[950,38,955,48],{"title":"G; Position: 12:18309688"}],["rect",[954,38,958,48],{"title":"A; Position: 12:18309689"}],["rect",[957,38,962,48],{"title":"G; Position: 12:18309690"}],["rect",[961,38,965,48],{"title":"G; Position: 12:18309691"}],["rect",[964,38,968,48],{"title":"A; Position: 12:18309692"}],["rect",[967,38,972,48],{"title":"G; Position: 12:18309693"}],["rect",[971,38,975,48],{"title":"G; Position: 12:18309694"}],["rect",[974,38,979,48],{"title":"G; Position: 12:18309695"}],["rect",[978,38,982,48],{"title":"G; Position: 12:18309696"}],["rect",[981,38,985,48],{"title":"T; Position: 12:18309697"}],["rect",[984,38,989,48],{"title":"C; Position: 12:18309698"}],["rect",[988,38,992,48],{"title":"A; Position: 12:18309699"}],["rect",[991,38,996,48],{"title":"G; Position: 12:18309700"}],["rect",[15,38,64,52],{"klass":["label","mqgUQPsM"],"alt":"Oryza barthii (Oryza barthii)"}],["rect",[150,57,996,69],{"title":"12:18300001..18400000","href":"/Oryza_barthii/ZMenu/Location/Contig?config=contigviewbottom;db=core;r=12:18309452-18309700;region=12:18300001..18400000;track=contig"}],["rect",[15,54,58,68],{"klass":["label","ZkiVs3nv"],"alt":"Oryza barthii (Oryza barthii)"}],["rect",[150,70,154,80],{"title":"T; Position: 12:18309452"}],["rect",[153,70,157,80],{"title":"G; Position: 12:18309453"}],["rect",[156,70,161,80],{"title":"T; Position: 12:18309454"}],["rect",[160,70,164,80],{"title":"T; Position: 12:18309455"}],["rect",[163,70,167,80],{"title":"C; Position: 12:18309456"}],["rect",[166,70,171,80],{"title":"T; Position: 12:18309457"}],["rect",[170,70,174,80],{"title":"T; Position: 12:18309458"}],["rect",[173,70,178,80],{"title":"A; Position: 12:18309459"}],["rect",[177,70,181,80],{"title":"G; Position: 12:18309460"}],["rect",[180,70,184,80],{"title":"T; Position: 12:18309461"}],["rect",[183,70,188,80],{"title":"C; Position: 12:18309462"}],["rect",[187,70,191,80],{"title":"G; Position: 12:18309463"}],["rect",[190,70,195,80],{"title":"T; Position: 12:18309464"}],["rect",[194,70,198,80],{"title":"G; Position: 12:18309465"}],["rect",[197,70,201,80],{"title":"G; Position: 12:18309466"}],["rect",[200,70,205,80],{"title":"T; Position: 12:18309467"}],["rect",[204,70,208,80],{"title":"A; Position: 12:18309468"}],["rect",[207,70,212,80],{"title":"C; Position: 12:18309469"}],["rect",[211,70,215,80],{"title":"A; Position: 12:18309470"}],["rect",[214,70,218,80],{"title":"A; Position: 12:18309471"}],["rect",[217,70,222,80],{"title":"T; Position: 12:18309472"}],["rect",[221,70,225,80],{"title":"T; Position: 12:18309473"}],["rect",[224,70,229,80],{"title":"A; Position: 12:18309474"}],["rect",[228,70,232,80],{"title":"A; Position: 12:18309475"}],["rect",[231,70,235,80],{"title":"A; Position: 12:18309476"}],["rect",[234,70,239,80],{"title":"T; Position: 12:18309477"}],["rect",[238,70,242,80],{"title":"T; Position: 12:18309478"}],["rect",[241,70,246,80],{"title":"T; Position: 12:18309479"}],["rect",[245,70,249,80],{"title":"C; Position: 12:18309480"}],["rect",[248,70,252,80],{"title":"T; Position: 12:18309481"}],["rect",[251,70,256,80],{"title":"A; Position: 12:18309482"}],["rect",[255,70,259,80],{"title":"A; Position: 12:18309483"}],["rect",[258,70,262,80],{"title":"T; Position: 12:18309484"}],["rect",[261,70,266,80],{"title":"A; Position: 12:18309485"}],["rect",[265,70,269,80],{"title":"T; Position: 12:18309486"}],["rect",[268,70,273,80],{"title":"T; Position: 12:18309487"}],["rect",[272,70,276,80],{"title":"A; Position: 12:18309488"}],["rect",[275,70,279,80],{"title":"A; Position: 12:18309489"}],["rect",[278,70,283,80],{"title":"G; Position: 12:18309490"}],["rect",[282,70,286,80],{"title":"G; Position: 12:18309491"}],["rect",[285,70,290,80],{"title":"T; Position: 12:18309492"}],["rect",[289,70,293,80],{"title":"A; Position: 12:18309493"}],["rect",[292,70,296,80],{"title":"T; Position: 12:18309494"}],["rect",[295,70,300,80],{"title":"G; Position: 12:18309495"}],["rect",[299,70,303,80],{"title":"T; Position: 12:18309496"}],["rect",[302,70,307,80],{"title":"A; Position: 12:18309497"}],["rect",[306,70,310,80],{"title":"T; Position: 12:18309498"}],["rect",[309,70,313,80],{"title":"G; Position: 12:18309499"}],["rect",[312,70,317,80],{"title":"T; Position: 12:18309500"}],["rect",[316,70,320,80],{"title":"T; Position: 12:18309501"}],["rect",[319,70,324,80],{"title":"C; Position: 12:18309502"}],["rect",[323,70,327,80],{"title":"T; Position: 12:18309503"}],["rect",[326,70,330,80],{"title":"T; Position: 12:18309504"}],["rect",[329,70,334,80],{"title":"A; Position: 12:18309505"}],["rect",[333,70,337,80],{"title":"G; Position: 12:18309506"}],["rect",[336,70,341,80],{"title":"T; Position: 12:18309507"}],["rect",[340,70,344,80],{"title":"C; Position: 12:18309508"}],["rect",[343,70,347,80],{"title":"T; Position: 12:18309509"}],["rect",[346,70,351,80],{"title":"T; Position: 12:18309510"}],["rect",[350,70,354,80],{"title":"A; Position: 12:18309511"}],["rect",[353,70,358,80],{"title":"G; Position: 12:18309512"}],["rect",[357,70,361,80],{"title":"T; Position: 12:18309513"}],["rect",[360,70,364,80],{"title":"C; Position: 12:18309514"}],["rect",[363,70,368,80],{"title":"C; Position: 12:18309515"}],["rect",[367,70,371,80],{"title":"G; Position: 12:18309516"}],["rect",[370,70,374,80],{"title":"T; Position: 12:18309517"}],["rect",[373,70,378,80],{"title":"C; Position: 12:18309518"}],["rect",[377,70,381,80],{"title":"T; Position: 12:18309519"}],["rect",[380,70,385,80],{"title":"G; Position: 12:18309520"}],["rect",[384,70,388,80],{"title":"G; Position: 12:18309521"}],["rect",[387,70,391,80],{"title":"A; Position: 12:18309522"}],["rect",[390,70,395,80],{"title":"G; Position: 12:18309523"}],["rect",[394,70,398,80],{"title":"A; Position: 12:18309524"}],["rect",[397,70,402,80],{"title":"A; Position: 12:18309525"}],["rect",[401,70,405,80],{"title":"C; Position: 12:18309526"}],["rect",[404,70,408,80],{"title":"G; Position: 12:18309527"}],["rect",[407,70,412,80],{"title":"T; Position: 12:18309528"}],["rect",[411,70,415,80],{"title":"A; Position: 12:18309529"}],["rect",[414,70,419,80],{"title":"G; Position: 12:18309530"}],["rect",[418,70,422,80],{"title":"A; Position: 12:18309531"}],["rect",[421,70,425,80],{"title":"G; Position: 12:18309532"}],["rect",[424,70,429,80],{"title":"T; Position: 12:18309533"}],["rect",[428,70,432,80],{"title":"G; Position: 12:18309534"}],["rect",[431,70,436,80],{"title":"G; Position: 12:18309535"}],["rect",[435,70,439,80],{"title":"G; Position: 12:18309536"}],["rect",[438,70,442,80],{"title":"A; Position: 12:18309537"}],["rect",[441,70,446,80],{"title":"T; Position: 12:18309538"}],["rect",[445,70,449,80],{"title":"G; Position: 12:18309539"}],["rect",[448,70,453,80],{"title":"A; Position: 12:18309540"}],["rect",[452,70,456,80],{"title":"A; Position: 12:18309541"}],["rect",[455,70,459,80],{"title":"C; Position: 12:18309542"}],["rect",[458,70,463,80],{"title":"A; Position: 12:18309543"}],["rect",[462,70,466,80],{"title":"T; Position: 12:18309544"}],["rect",[465,70,469,80],{"title":"T; Position: 12:18309545"}],["rect",[468,70,473,80],{"title":"T; Position: 12:18309546"}],["rect",[472,70,476,80],{"title":"G; Position: 12:18309547"}],["rect",[475,70,480,80],{"title":"T; Position: 12:18309548"}],["rect",[479,70,483,80],{"title":"T; Position: 12:18309549"}],["rect",[482,70,486,80],{"title":"G; Position: 12:18309550"}],["rect",[485,70,490,80],{"title":"A; Position: 12:18309551"}],["rect",[489,70,493,80],{"title":"T; Position: 12:18309552"}],["rect",[492,70,497,80],{"title":"T; Position: 12:18309553"}],["rect",[496,70,500,80],{"title":"T; Position: 12:18309554"}],["rect",[499,70,503,80],{"title":"G; Position: 12:18309555"}],["rect",[502,70,507,80],{"title":"T; Position: 12:18309556"}],["rect",[506,70,510,80],{"title":"T; Position: 12:18309557"}],["rect",[509,70,514,80],{"title":"G; Position: 12:18309558"}],["rect",[513,70,517,80],{"title":"G; Position: 12:18309559"}],["rect",[516,70,520,80],{"title":"T; Position: 12:18309560"}],["rect",[519,70,524,80],{"title":"A; Position: 12:18309561"}],["rect",[523,70,527,80],{"title":"T; Position: 12:18309562"}],["rect",[526,70,531,80],{"title":"G; Position: 12:18309563"}],["rect",[530,70,534,80],{"title":"T; Position: 12:18309564"}],["rect",[533,70,537,80],{"title":"T; Position: 12:18309565"}],["rect",[536,70,541,80],{"title":"C; Position: 12:18309566"}],["rect",[540,70,544,80],{"title":"G; Position: 12:18309567"}],["rect",[543,70,548,80],{"title":"G; Position: 12:18309568"}],["rect",[547,70,551,80],{"title":"C; Position: 12:18309569"}],["rect",[550,70,554,80],{"title":"T; Position: 12:18309570"}],["rect",[553,70,558,80],{"title":"A; Position: 12:18309571"}],["rect",[557,70,561,80],{"title":"C; Position: 12:18309572"}],["rect",[560,70,565,80],{"title":"T; Position: 12:18309573"}],["rect",[564,70,568,80],{"title":"A; Position: 12:18309574"}],["rect",[567,70,571,80],{"title":"G; Position: 12:18309575"}],["rect",[570,70,575,80],{"title":"A; Position: 12:18309576"}],["rect",[574,70,578,80],{"title":"A; Position: 12:18309577"}],["rect",[577,70,581,80],{"title":"C; Position: 12:18309578"}],["rect",[580,70,585,80],{"title":"G; Position: 12:18309579"}],["rect",[584,70,588,80],{"title":"A; Position: 12:18309580"}],["rect",[587,70,592,80],{"title":"T; Position: 12:18309581"}],["rect",[591,70,595,80],{"title":"C; Position: 12:18309582"}],["rect",[594,70,598,80],{"title":"C; Position: 12:18309583"}],["rect",[597,70,602,80],{"title":"G; Position: 12:18309584"}],["rect",[601,70,605,80],{"title":"T; Position: 12:18309585"}],["rect",[604,70,609,80],{"title":"T; Position: 12:18309586"}],["rect",[608,70,612,80],{"title":"G; Position: 12:18309587"}],["rect",[611,70,615,80],{"title":"T; Position: 12:18309588"}],["rect",[614,70,619,80],{"title":"T; Position: 12:18309589"}],["rect",[618,70,622,80],{"title":"T; Position: 12:18309590"}],["rect",[621,70,626,80],{"title":"T; Position: 12:18309591"}],["rect",[625,70,629,80],{"title":"C; Position: 12:18309592"}],["rect",[628,70,632,80],{"title":"C; Position: 12:18309593"}],["rect",[631,70,636,80],{"title":"C; Position: 12:18309594"}],["rect",[635,70,639,80],{"title":"C; Position: 12:18309595"}],["rect",[638,70,643,80],{"title":"T; Position: 12:18309596"}],["rect",[642,70,646,80],{"title":"T; Position: 12:18309597"}],["rect",[645,70,649,80],{"title":"T; Position: 12:18309598"}],["rect",[648,70,653,80],{"title":"T; Position: 12:18309599"}],["rect",[652,70,656,80],{"title":"T; Position: 12:18309600"}],["rect",[655,70,660,80],{"title":"T; Position: 12:18309601"}],["rect",[659,70,663,80],{"title":"A; Position: 12:18309602"}],["rect",[662,70,666,80],{"title":"C; Position: 12:18309603"}],["rect",[665,70,670,80],{"title":"T; Position: 12:18309604"}],["rect",[669,70,673,80],{"title":"C; Position: 12:18309605"}],["rect",[672,70,677,80],{"title":"T; Position: 12:18309606"}],["rect",[676,70,680,80],{"title":"T; Position: 12:18309607"}],["rect",[679,70,683,80],{"title":"T; Position: 12:18309608"}],["rect",[682,70,687,80],{"title":"T; Position: 12:18309609"}],["rect",[686,70,690,80],{"title":"G; Position: 12:18309610"}],["rect",[689,70,693,80],{"title":"A; Position: 12:18309611"}],["rect",[692,70,697,80],{"title":"G; Position: 12:18309612"}],["rect",[696,70,700,80],{"title":"A; Position: 12:18309613"}],["rect",[699,70,704,80],{"title":"T; Position: 12:18309614"}],["rect",[703,70,707,80],{"title":"T; Position: 12:18309615"}],["rect",[706,70,710,80],{"title":"T; Position: 12:18309616"}],["rect",[709,70,714,80],{"title":"T; Position: 12:18309617"}],["rect",[713,70,717,80],{"title":"C; Position: 12:18309618"}],["rect",[716,70,721,80],{"title":"C; Position: 12:18309619"}],["rect",[720,70,724,80],{"title":"T; Position: 12:18309620"}],["rect",[723,70,727,80],{"title":"T; Position: 12:18309621"}],["rect",[726,70,731,80],{"title":"T; Position: 12:18309622"}],["rect",[730,70,734,80],{"title":"T; Position: 12:18309623"}],["rect",[733,70,738,80],{"title":"T; Position: 12:18309624"}],["rect",[737,70,741,80],{"title":"T; Position: 12:18309625"}],["rect",[740,70,744,80],{"title":"C; Position: 12:18309626"}],["rect",[743,70,748,80],{"title":"C; Position: 12:18309627"}],["rect",[747,70,751,80],{"title":"A; Position: 12:18309628"}],["rect",[750,70,755,80],{"title":"A; Position: 12:18309629"}],["rect",[754,70,758,80],{"title":"C; Position: 12:18309630"}],["rect",[757,70,761,80],{"title":"G; Position: 12:18309631"}],["rect",[760,70,765,80],{"title":"A; Position: 12:18309632"}],["rect",[764,70,768,80],{"title":"C; Position: 12:18309633"}],["rect",[767,70,772,80],{"title":"C; Position: 12:18309634"}],["rect",[771,70,775,80],{"title":"C; Position: 12:18309635"}],["rect",[774,70,778,80],{"title":"T; Position: 12:18309636"}],["rect",[777,70,782,80],{"title":"C; Position: 12:18309637"}],["rect",[781,70,785,80],{"title":"T; Position: 12:18309638"}],["rect",[784,70,788,80],{"title":"C; Position: 12:18309639"}],["rect",[787,70,792,80],{"title":"G; Position: 12:18309640"}],["rect",[791,70,795,80],{"title":"T; Position: 12:18309641"}],["rect",[794,70,799,80],{"title":"T; Position: 12:18309642"}],["rect",[798,70,802,80],{"title":"T; Position: 12:18309643"}],["rect",[801,70,805,80],{"title":"A; Position: 12:18309644"}],["rect",[804,70,809,80],{"title":"C; Position: 12:18309645"}],["rect",[808,70,812,80],{"title":"G; Position: 12:18309646"}],["rect",[811,70,816,80],{"title":"T; Position: 12:18309647"}],["rect",[815,70,819,80],{"title":"A; Position: 12:18309648"}],["rect",[818,70,822,80],{"title":"A; Position: 12:18309649"}],["rect",[821,70,826,80],{"title":"G; Position: 12:18309650"}],["rect",[825,70,829,80],{"title":"T; Position: 12:18309651"}],["rect",[828,70,833,80],{"title":"G; Position: 12:18309652"}],["rect",[832,70,836,80],{"title":"T; Position: 12:18309653"}],["rect",[835,70,839,80],{"title":"C; Position: 12:18309654"}],["rect",[838,70,843,80],{"title":"G; Position: 12:18309655"}],["rect",[842,70,846,80],{"title":"A; Position: 12:18309656"}],["rect",[845,70,850,80],{"title":"T; Position: 12:18309657"}],["rect",[849,70,853,80],{"title":"A; Position: 12:18309658"}],["rect",[852,70,856,80],{"title":"A; Position: 12:18309659"}],["rect",[855,70,860,80],{"title":"A; Position: 12:18309660"}],["rect",[859,70,863,80],{"title":"T; Position: 12:18309661"}],["rect",[862,70,867,80],{"title":"G; Position: 12:18309662"}],["rect",[866,70,870,80],{"title":"T; Position: 12:18309663"}],["rect",[869,70,873,80],{"title":"G; Position: 12:18309664"}],["rect",[872,70,877,80],{"title":"G; Position: 12:18309665"}],["rect",[876,70,880,80],{"title":"A; Position: 12:18309666"}],["rect",[879,70,884,80],{"title":"G; Position: 12:18309667"}],["rect",[883,70,887,80],{"title":"T; Position: 12:18309668"}],["rect",[886,70,890,80],{"title":"T; Position: 12:18309669"}],["rect",[889,70,894,80],{"title":"T; Position: 12:18309670"}],["rect",[893,70,897,80],{"title":"T; Position: 12:18309671"}],["rect",[896,70,900,80],{"title":"C; Position: 12:18309672"}],["rect",[899,70,904,80],{"title":"G; Position: 12:18309673"}],["rect",[903,70,907,80],{"title":"T; Position: 12:18309674"}],["rect",[906,70,911,80],{"title":"T; Position: 12:18309675"}],["rect",[910,70,914,80],{"title":"T; Position: 12:18309676"}],["rect",[913,70,917,80],{"title":"A; Position: 12:18309677"}],["rect",[916,70,921,80],{"title":"C; Position: 12:18309678"}],["rect",[920,70,924,80],{"title":"A; Position: 12:18309679"}],["rect",[923,70,928,80],{"title":"A; Position: 12:18309680"}],["rect",[927,70,931,80],{"title":"C; Position: 12:18309681"}],["rect",[930,70,934,80],{"title":"A; Position: 12:18309682"}],["rect",[933,70,938,80],{"title":"A; Position: 12:18309683"}],["rect",[937,70,941,80],{"title":"C; Position: 12:18309684"}],["rect",[940,70,945,80],{"title":"T; Position: 12:18309685"}],["rect",[944,70,948,80],{"title":"C; Position: 12:18309686"}],["rect",[947,70,951,80],{"title":"C; Position: 12:18309687"}],["rect",[950,70,955,80],{"title":"C; Position: 12:18309688"}],["rect",[954,70,958,80],{"title":"T; Position: 12:18309689"}],["rect",[957,70,962,80],{"title":"C; Position: 12:18309690"}],["rect",[961,70,965,80],{"title":"C; Position: 12:18309691"}],["rect",[964,70,968,80],{"title":"T; Position: 12:18309692"}],["rect",[967,70,972,80],{"title":"C; Position: 12:18309693"}],["rect",[971,70,975,80],{"title":"C; Position: 12:18309694"}],["rect",[974,70,979,80],{"title":"C; Position: 12:18309695"}],["rect",[978,70,982,80],{"title":"C; Position: 12:18309696"}],["rect",[981,70,985,80],{"title":"A; Position: 12:18309697"}],["rect",[984,70,989,80],{"title":"G; Position: 12:18309698"}],["rect",[988,70,992,80],{"title":"T; Position: 12:18309699"}],["rect",[991,70,996,80],{"title":"C; Position: 12:18309700"}],["rect",[15,70,64,84],{"alt":"Oryza barthii (Oryza barthii)","klass":["label","Q5t8E9U3"]}],["rect",[981,86,996,95],{"title":"Transcript: OBART12G17650.1; Gene: OBART12G17650; Location: 12:18309697-18314169","href":"/Oryza_barthii/ZMenu/Transcript/View?calling_sp=Oryza_barthii;config=contigviewbottom;db=core;g=OBART12G17650;r=12:18309452-18309700;real_r=12:18309452-18309700;t=OBART12G17650.1;track=transcript_core_ensembl","klass":["group"]}],["rect",[981,94,1184,108],{"href":"/Oryza_barthii/ZMenu/Transcript/View?calling_sp=Oryza_barthii;config=contigviewbottom;db=core;g=OBART12G17650;r=12:18309452-18309700;real_r=12:18309452-18309700;t=OBART12G17650.1;track=transcript_core_ensembl","title":"Transcript: OBART12G17650.1; Gene: OBART12G17650; Location: 12:18309697-18314169"}],["rect",[15,86,46,100],{"klass":["label","FcUtTZ03"],"alt":"Oryza barthii (Oryza barthii)"}],["rect",[981,132,996,141],{"klass":["group"],"title":"Transcript: FGENESHPRED00000040003; Gene: FGENESHPRED00000040003; Location: 12:18309697-18314169","href":"/Oryza_barthii/ZMenu/Transcript/View?calling_sp=Oryza_barthii;config=contigviewbottom;db=core;pt=FGENESHPRED00000040003;r=12:18309452-18309700;real_r=12:18309452-18309700;track=transcript_core_fgenesh"}],["rect",[981,140,1250,154],{"title":"Transcript: FGENESHPRED00000040003; Gene: FGENESHPRED00000040003; Location: 12:18309697-18314169","href":"/Oryza_barthii/ZMenu/Transcript/View?calling_sp=Oryza_barthii;config=contigviewbottom;db=core;pt=FGENESHPRED00000040003;r=12:18309452-18309700;real_r=12:18309452-18309700;track=transcript_core_fgenesh"}],["rect",[981,132,996,185],{"klass":["group"],"title":"Transcript: FGENESHPRED00000000628; Gene: FGENESHPRED00000000628; Location: 12:18309697-18314169","href":"/Oryza_barthii/ZMenu/Transcript/View?calling_sp=Oryza_barthii;config=contigviewbottom;db=core;pt=FGENESHPRED00000000628;r=12:18309452-18309700;real_r=12:18309452-18309700;track=transcript_core_fgenesh"}],["rect",[981,184,1250,198],{"title":"Transcript: FGENESHPRED00000000628; Gene: FGENESHPRED00000000628; Location: 12:18309697-18314169","href":"/Oryza_barthii/ZMenu/Transcript/View?calling_sp=Oryza_barthii;config=contigviewbottom;db=core;pt=FGENESHPRED00000000628;r=12:18309452-18309700;real_r=12:18309452-18309700;track=transcript_core_fgenesh"}],["rect",[15,132,124,146],{"alt":"Oryza barthii (Oryza barthii)","klass":["label","OxVWyiTa"]}],["rect",[15,255,82,269],{"alt":"Oryza barthii (Oryza barthii)","klass":["label","EuClVbdA"]}],["rect",[150,5,996,254],{"klass":["drag"],"href":"#drag|1|3|Oryza_barthii|12|18309452|18309700|1","alt":"Click and drag to select a region"}]]
FGENESH prediction
Ab initio prediction of protein coding genes, based on the genomic sequence alone AA Salamov et al., Genome Res. 2000 4:516-22.
Change track style:
Off
No labels
With labelsURL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Genes
This track comprises multiple analyses
RNA genes produced by filtering predictions from tRNAscan-SE v1.23.
RNA genes produced by filtering alignments of Rfam (release 12.2) covariance models.
Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.
Change track style:
No exon structure without labels
No exon structure with labels
Collapsed without labels
Collapsed with labels
Coding transcripts only (in coding genes)URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Sequence
Track showing sequence in both directions. Only displayed at 1Kb and below.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Sequence
Track showing sequence in both directions. Only displayed at 1Kb and below.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Genes
This track comprises multiple analyses
RNA genes produced by filtering predictions from tRNAscan-SE v1.23.
RNA genes produced by filtering alignments of Rfam (release 12.2) covariance models.
Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.
Change track style:
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
FGENESH prediction
Ab initio prediction of protein coding genes, based on the genomic sequence alone AA Salamov et al., Genome Res. 2000 4:516-22.
Change track style:
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
.
Ensembl Plants release 62 - September 2025 © EMBL-EBI EMBL-EBI
.
![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
![[twitter logo]](/i/twitter.png "Follow us on Twitter!")
.
