EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Oryza barthii (O.barthii_v1)
Description

FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of /.../w 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). [Source:Projected from Arabidopsis thaliana (AT3G27100) TAIR;Acc:AT3G27100]

Location
About this gene

This gene has 3 transcripts (splice variants) and 126 orthologues.

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
-OBART01G42030.3513170aaOBART01G42030.3
 
Protein coding
A0A0D3EXY5 Ensembl Canonical
-OBART01G42030.1478138aaOBART01G42030.1
 
Protein coding
A0A0D3EXY3 -
-OBART01G42030.2417138aaOBART01G42030.2
 
Protein coding
A0A0D3EXY3 -
Genomic alignments
Gene tree
Orthologues
Paralogues (Not available)
Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.