Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: rna5314

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Description

putative transcription factor C2H2 family

Location

Primary_assembly CM010648.1: 44,658,989-44,665,614 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 33 domains and features.

Gene

This transcript is a product of gene gene5314 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	rna5314	3472	851aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G8A1I5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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General identifiers

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This transcript corresponds to the following database identifiers:

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External database	Database identifier
European Nucleotide Archive	CM001217 [align] [view all locations] PSQE01000001 [align] [view all locations]
INSDC protein ID	KEH43339.1 [align] [view all locations] RHN81298.1 [align] [view all locations]
RefSeq mRNA predicted	XM_013613847.3 [Target %id: 96; Query %id: 100] [align] PREDICTED: Medicago truncatula uncharacterized LOC25484842 (LOC25484842), transcript variant X1, mRNA. [view all locations] XM_024784532.2 [Target %id: 91; Query %id: 90] [align] PREDICTED: Medicago truncatula uncharacterized LOC25484842 (LOC25484842), transcript variant X2, mRNA. [view all locations]
RefSeq peptide predicted	XP_013469301.1 [Target %id: 100; Query %id: 100] [align] uncharacterized protein LOC25484842 [view all locations] XP_024640300.1 [Target %id: 100; Query %id: 100] [align] uncharacterized protein LOC25484842 [view all locations]
STRING	3880.G8A1I5 [view all locations]
UniParc	UPI00023AC76E [view all locations]
UniProtKB/TrEMBL	G8A1I5.66 [Target %id: 100; Query %id: 100] [align] Putative transcription factor C2H2 family; RING/U-box protein [view all locations]

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