Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: rna26603

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Description

putative histone deacetylase

Location

Primary_assembly CM010651.1: 54,439,086-54,449,479 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene gene26603 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	rna26603	2471	599aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A072UQH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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General identifiers

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This transcript corresponds to the following database identifiers:

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External database	Database identifier
European Nucleotide Archive	CM001220 [align] [view all locations] PSQE01000004 [align] [view all locations]
INSDC protein ID	KEH32089.1 [align] [view all locations] RHN63849.1 [align] [view all locations]
RefSeq mRNA predicted	XM_013602604.3 [Target %id: 93; Query %id: 100] [align] PREDICTED: Medicago truncatula histone deacetylase 15 (LOC25493939), transcript variant X2, mRNA. [view all locations]
RefSeq peptide predicted	XP_013458058.1 [Target %id: 100; Query %id: 100] [align] histone deacetylase 15 isoform X1 [view all locations] XP_039689238.1 [Target %id: 100; Query %id: 100] [align] histone deacetylase 15 isoform X1 [view all locations]
UniParc	UPI00049BAD62 [view all locations]
UniProtKB/TrEMBL	A0A072UQH9.46 [Target %id: 100; Query %id: 100] [align] Histone deacetylase superfamily protein; Putative histone deacetylase [view all locations]

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