Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: rna25127

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Description

putative chromatin regulator PHD family

Location

Primary_assembly CM010651.1: 44,203,214-44,210,194 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 20 domains and features.

Gene

This transcript is a product of gene gene25127 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	rna25127	4452	1282aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G7JSV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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General identifiers

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This transcript corresponds to the following database identifiers:

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External database	Database identifier
European Nucleotide Archive	CM001220 [align] [view all locations] PSQE01000004 [align] [view all locations]
INSDC protein ID	AES90468.1 [align] [view all locations] RHN62537.1 [align] [view all locations]
RefSeq mRNA predicted	XM_003608223.4 [Target %id: 97; Query %id: 100] [align] PREDICTED: Medicago truncatula lysine-specific demethylase JMJ25 (LOC11429524), mRNA. [view all locations]
RefSeq peptide predicted	XP_003608271.1 [Target %id: 100; Query %id: 100] [align] lysine-specific demethylase JMJ25 [view all locations]
STRING	3880.G7JSV4 [view all locations]
UniParc	UPI00023639A2 [view all locations]
UniProtKB/TrEMBL	G7JSV4.58 [Target %id: 100; Query %id: 100] [align] Putative chromatin regulator PHD family; Transcription factor jumonji (JmjC) domain protein [view all locations]

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