Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: rna19888

.

Description

putative chromatin remodeler Bromodomain family

Location

Primary_assembly CM010650.1: 57,484,262-57,488,904 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 30 domains and features.

Gene

This transcript is a product of gene gene19888 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	rna19888	2508	660aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A072V4R1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

General identifiers

.

This transcript corresponds to the following database identifiers:

Download what you see Download whole table

Filter

External database	Database identifier
European Nucleotide Archive	CM001219 [align] [view all locations] PSQE01000003 [align] [view all locations]
INSDC protein ID	KEH36328.1 [align] [view all locations] RHN71232.1 [align] [view all locations]
RefSeq mRNA predicted	XM_013606839.3 [Target %id: 97; Query %id: 99] [align] PREDICTED: Medicago truncatula ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800 (LOC25490319), mRNA. [view all locations]
RefSeq peptide predicted	XP_013462293.1 [Target %id: 100; Query %id: 100] [align] ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800 [view all locations]
STRING	3880.A0A072V4R1 [view all locations]
UniParc	UPI00049D6D49 [view all locations]
UniProtKB/TrEMBL	A0A072V4R1.47 [Target %id: 100; Query %id: 100] [align] DNA-binding bromodomain protein; Putative chromatin remodeler Bromodomain family [view all locations]

.

Personal Data