Medicago truncatula (MtrunA17r5.0_ANR)
Description

putative aminoacyltransferase, E1 ubiquitin-activating enzyme

About this transcript

This transcript has 14 exons and is annotated with 29 domains and features.

Gene

This transcript is a product of gene gene37486 Show transcript tableHide transcript table

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-rna3748647601234aa
 
Protein coding
G7KMZ7 Ensembl Canonical
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
  • UTR
Markup
  • loading
Show/hide columns
  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........agtttcacatgtatataaacatcatcatgatcttcgctcattcgctcgca
1rna37486-E138,715,26438,715,791-0528
GGTTGTCTTTTTGCAAACTTAAAATTTATTTTCTCTTCTCACAAAATTAATTTTTTACAA
AAAAACAATAATTCACAACAAAAAAAATCTTACAAACAGTTAACAACAATAGCAACCAAG
ACTCAAAACCTAGAGAGAGAAAATTTTCCCGGAAAATTCACCGAGAAAATTCGCTGAGAA
AATTCGAAAACGAAAAAAGAAGAGAGAGAGAGAGAGAGAGAGAGGATGGCGACGCCGTTA
ATTCCGCAACAGCAGCACTTAGACGGCGGAGGAGGAGTGGCGGTTCTGACGACTCTTGTT
CCTCCTTCTTCTTCCAATGGTGGTGGTGGATTCAACCGTTCCTCTTTAACGGAATCGCCA
ATTTTGATTTTCTCGTTCTTTCAAAAAGCGATTGGGAATGAGCTTGATGCGTTGCATCGA
TTAGCTTTGGATTTTGCTACTGGAAATTGTTTTGATATTGGACCGTTATCGGAACGGTAT
CATTTTCTTAGATCGATGTATAGACACCATTCCAATGCTGAAGACGAG            
 Intron 1-238,715,79238,716,9221,131
gttcattttttttattattcttttt..........ttggggaatctgttctggaatatag
2rna37486-E238,716,92338,717,13200210
GTGATTTTTCCAGCTCTAGATAGGCGTGTAAAGAACGTAGCACAGACATATTCTCTTGAA
CACAAGGGGGAAAGCAACCTCTTTGACCATTTATTTGAGCTTTTAAACTCTTCCGGTGAC
AATGATGAAAGTTTCCGAAGGGAGTTAGCATCCTGCACAGGAGCTCTGCAGACATCTGTT
AGCCAACACATGGCTAAGGAGCAGCAGCAA                              
 Intron 2-338,717,13338,717,898766
gtaagtttattcaatatatctttcc..........atttttatttattggatgatatcag
3rna37486-E338,717,89938,718,09300195
GTTTTTCCGCTGCTTATTGAGAAGTTCTCCGTGGAGGAGCAAGCATCTTTAGTTTGGCAG
TTTCTTTGCAGTATTCCAGTGAATATGATGGCAGAATTTCTGCCATGGCTTTCAACATCA
ATATCACCTGATGAATCTCAGGATTTGCGGAAGTGCTTAAGCAAGATAGTGCCAGAGGAA
AAGCTTCTTCAAAAG                                             
 Intron 3-438,718,09438,718,229136
gtgtggttttgaatgctgctttaga..........ctgattatattcttgtttatttaag
4rna37486-E438,718,23038,718,58502356
GTTATTTTCACCTGGATGGAAGGGCGAAGTAGTGCTAAGACAGTTGAAAATTGTGTAGAT
CATTCTCAGGTTCAATGCAGTCCTAGTCCTTTAGCCCATCAGAATGGGAAAGCAACATGT
GCATGTGAGTCCACTGTATGTGGGAAAAGAAAATATTCTGCATCTCTTCTAGAAGTTCCG
GATACAATGGGTTCACATCCGATAGATGAAATATTGCTCTGGCATAATGCTATAAAAAAA
GAGTTAAATGAGATAGCAGCAGAGACCAGAAAGATACAACACTCTGGAGATTATACTAAT
CTGTCTGCTTTTAATGAAAGGTTGCAATTCATCGCCGAAGTTTTCATATTTCACAG    
 Intron 4-538,718,58638,719,057472
gtatcatcaccttcacttgtttatg..........taattaactatttctataaatgcag
5rna37486-E538,719,05838,719,28620229
TATTGCTGAGGACAAGGTTATTTTTCCGGCAGTAGATGGGGATTTTTCTTTCTTTCAGGA
GCATGCTGAAGAAGAAAGCCAATTTAACGACTTCCGATCTTTGATTGAAAGAATTGTAAG
TGAAGAAGCAACATCTAGTTCAGAAGTTGAACTTTATTCCATGTTGTGCTCACAAGCTGA
TCATATAATGGAAACCATACAGAAGCATTTCCATAATGAAGAAGTTCAG           
 Intron 5-638,719,28738,719,685399
gtaattcgtctggcatttccataat..........cgtgggtaatatctcacatctgtag
6rna37486-E638,719,68638,719,85401169
GTTCTTCCACTTGCACGGAAGCACTTTAGCCTCCAAAGGCAACGTGAACTAGTGTATGAA
AGCTTGTGTATGATGCCTCTGAAATTGATTGAGCGTGTCCTACCATGGTTTGTTGGATCA
CTAACCGAAGATGAAGCAGAGATATTTCTGAAAAACATACAATCGGCAG           
 Intron 6-738,719,85538,719,94086
gttctatatctattttgatttactt..........ctgacaaattgtgtatctgttccag
7rna37486-E738,719,94138,721,152111,212
CTCCAGCAATGGATTCTGCTTTAGTCACACTCTTCTCTGGTTGGGCTTGCAAGGCTCGTA
AAAATGGTCGGTGCTTGTCTTCAAGTGCATCACGTTTCTGTCCTGCTAAAAAAATAGTCC
GGTCTTCCTGTGCTTGTGCTTCTGCATTGTCTGGTAAAGATTGCTCAGTATTAGCTGAAT
CAGATGGGACCCAAAGATCAGTCAAGCGAAGCATATTAGAGTTGCAAAAAAATGGAGATG
TCTCAAAAACACCAGAAAATGAACCGGCCCTGAAACCATGTTGTGGTGGCCGGTCTTGTT
GTGTGCCAGCGTTAGGGGTCAACAGTAACAATTTGGGGCTGAGTTCACTTTCTGCAGCCA
AGTCCTTACGAAACTTCACTTCTTCCGCCCCATCTATTAATTCTAGTCTTTTCATATGGG
AAACAGACAGCAGCTCATGTGATGTTGGCTCTGCAGAAAGACCAATTGATACCATATTTA
AATTCCATAAAGCTATACGCATAGATTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTT
GTGATGGCGATGAAGCAACTATCCGGCAATTTACTGGAAGATTTCGTCTTTTGTGGGGTT
TATACAGAGCTCATAGTAATGCTGAAGACGATATAGTTTTTCCTGCATTGGAATCCAAAG
AGACACTTCATAATGTGAGCCATTCATACACGCTTGATCATAAGGCAGAAGAAAAGTTAT
TTGAAGATATTTCTTGTGTTCTTTCTGAGCTCTCTGTCCTTCATGAAGCATTGCAGAGTA
CCCATTTGTCAGAGGATTTAAGTGAACCTAATTCGGGAATATCTGATGCTAATGATAGTG
ATGATATCAGAAAGTATAATGAGCTTGCAACTAAGCTACAAGGGATGTGTAAATCTATAC
GAGTGACACTGGATCAGCATATTTTCAGGGAAGAGCTCGAACTCTGGCCATTGTTTGGGA
AACATTTCACTGTGGAAGAACAAGACAAGATAGTGGGCCGGATAATTGGAACTACAGGGG
CCGAAGTTCTCCAGTCAATGTTACCGTGGGTAACTTCTGCACTTACACAAGATGAACAGA
ACCAAATGATGGACACATGGAAACAAGCAACTAAGAACACAATGTTCAACGAATGGCTAA
ATGAAAGCTTGATAGAGAGTCCAGGATCTACATCACAGACAGAAACATCAGAACATAGCA
CTTCTCAAAGAG                                                
 Intron 7-838,721,15338,721,23886
gtctctaatatgctttgatcttttt..........tattgattgttatggttttgtatag
8rna37486-E838,721,23938,721,41012172
GTGCTGAATATCAAGAAAGCTTGAACCTGAATGATCAGATGTTTAAGCCGGGTTGGAAAG
ACATATTCCGGATGAATGAAAATGAAATTGTGTCCGAAATCCGGAAGGTTTATCGTGACT
CAACCCTTGATCCAAGAAGAAAGGCATACCTTGTGCAGAATCTCATGACAAG        
 Intron 8-938,721,41138,721,534124
gttgattccagtttacgtaatttta..........ttcattagttctttgttcattgtag
9rna37486-E938,721,53538,721,75622222
TCGCTGGATAGCCGCCCAACAGAAGTTACCTAACTCTCAATCTGGGGAATCATCTAATAA
ACAAATAGAAGGTTGCGCACCTTCATTTCGGGACCCAGAGAAAAAAGTATTTGGTTGTGA
GCACTATAAGAGAAATTGCAAAGTTCGAGCTGCTTGTTGTGAGAAGTTATTTACATGCAG
ATTTTGTCATGACAACAATTCAACTGATCACTCAATGGATAG                  
 Intron 9-1038,721,75738,721,83175
gtaatattttttttagatttcttaa..........ctaattatctgcttgataattgcag
10rna37486-E1038,721,83238,721,96922138
AAAAGCAACAACGGAAATGATGTGTATGGCCTGCCTGACTATACAGCCAGTTGGACCGAT
ATGCATGACGCCTTCATGTAATGGACTTTCAATGGCAAAGTACTACTGTAACATTTGCAA
ATTTTTTGATGATGAAAG                                          
 Intron 10-1138,721,97038,722,644675
gtaattttggttcttactttagaat..........cttttaacatggcatcgttcctcag
11rna37486-E1138,722,64538,722,87920235
GAATGTTTACCATTGCCCATTCTGCAACATATGCCGTGTTGGACAAGGGCTTGGCATTGA
TTACTTTCATTGTATGAAATGCAATTGTTGTGTGGGGATCAAATCAGTGTCTCACAAGTG
CCGGGAGAAAGGCTTAGAAATGAACTGCCCAATTTGTTGTGACGACTTGTTCACATCAAG
TGCAACGGTCAGAGCTCTAGTTTGTGGGCATTACATGCATTCATCTTGCTTTCAG     
 Intron 11-1238,722,88038,723,037158
gtatgtcacgccccttttagggttt..........ctcatgctttgttttaaattgttag
12rna37486-E1238,723,03838,723,0970060
GCCTACGCTTGCAGTCATTACACATGCCCAATCTGCAGCAAGTCATTGGGAGATATGGCG
 Intron 12-1338,723,09838,723,521424
gtaagaacaaaattcttttatgtct..........cttagctgtttctctacctacccag
13rna37486-E1338,723,52238,723,5930072
GTTTACTTCGGTATGCTTGATGCATTGCTGGCTGCTGAGCAGCTTCCTGAAGAGTACAAG
GACCGCACTCAG                                                
 Intron 13-1438,723,59438,724,235642
gtattatttccgcctgtttttaata..........attcatttttctattgccaatgcag
14rna37486-E1438,724,23638,725,1970-962
GACATACTTTGTCATGACTGCGATCGAAAAGGAACTTCACAATTCCACTGGTTATATCAT
AAATGTGGATTTTGTGGCTCATACAATACCCGGGTGATCAAAAGCGAGACAACAAATTCC
AGCTGCCCTTAATGCGATTTTCTTATAAGTAAAAAGAGTTTGTATATAGCCTGTGTTTGG
ATCCGCATGAGTGTGTTTTTCTTGCGTCCAGTGCCATCTTAGTTTGGTTCTATCGATGCA
ACAAATTGGATATTCAAGTGGACATACTGCGGGACACAACGAATGCGGAAACAAACACAA
CTATACTTGTATAGGCAATCCAATTTTTCCCCACCAAGAACCTGTAACGTTTCTTGTTAT
ACATAATGCGAGTGAGTCACTTCCACGGAGGCCTCTTATGAGATAGAAGCAGCAAACAAG
CACCATAGTTCTCATGTATAGATCAACTTTCTTCTATTCAGTCAAAAAAAGATAAACATT
TTCCCACTCTTTTTGCAATAGATGTTTTAGCCACTCCTCTTTTTTTTTTCCCTTGTTAGA
GTTCACTCAAAGTTGGCACTATTGTTGCTTCACACATTTCGGGTGGGAAGAGATTCATTG
AGTTACTTAAGCTACTTAGCCTTATGAGAATTTTTTCCTTGTGATTTTAAGGAGCATCCA
TTATTTATAACACTGTCATTTTAAGCACGGTTATGTAATTGTTGTAACTTCTGTCTATAT
AGATAGATGCTATACACTGATAGAGTAATGAACATGAGTAAAGTTTGAATGACAGAGTTC
AGATATGATGGTGTTGAGTTTGAATTGTGGTGATAGATCTAAATAAACAAGCACTTTTGT
TTTACAAAAGAAGAAATCATGTCAATTTAAAGGCTAAATTACATTGGATCATATGTCCTT
TTGAGTTATTTAATTATAACAAGTTGATCATTTAAGTTTTTTCAGTATCACTTATGTTTT
TA                                                          
3' downstream sequence
agttatttaattataacaaattagtcatttaagtgttctttgtaacactt..........