5' upstream sequence
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"}}},"flourishes":{},"expect":[],"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#008000"]]}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
..........gagtggagagctatttcatttaaacttttgttataaaaaagaatttaaaa
1 rna31697-E1 29,795,974 29,796,200 - - 227
{"provisional":{"expect":[],"seq":[{"style":[1]},-2,{"style":[1,-46,0]}],"ref":{"style":[[0,""],[0,"color:#cd6839"]]},"legend":{"_messages":[],"exons/Introns":{"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"},"utr":{"label":"#cd6839","class":"eu","default":null,"text":"UTR"},"flanking":{"class":"ef","label":"#008000","default":null,"text":"Flanking sequence"}}},"flourishes":{}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
TTGCATAAAGTAGTGGTGTTTTTGTTGAAACACTTTCTTTAAATCAAAGTCTATAATATT TTAATGCAAGGATTCTTAGTTTATGTTACTTTGTGACAAATGGAGGATTCTTAGTTTTTG TTTCTTCTTTTCCTTTCACTTTGTACTCTCAAGTCTCAAGCAAAATCTCTAACCTCTCTC TTCTCTTCCACTTCCTCTTCACTCTTTTGATCTTGCTGATTCTTCGG
Intron 1-2 29,796,201 29,796,640 440
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"utr":{"text":"UTR","default":null,"class":"eu","label":"#cd6839"},"flanking":{"text":"Flanking sequence","default":null,"class":"ef","label":"#008000"},"exon1":{"text":"Translated sequence","default":null,"label":"#1044ee","class":"e1"},"intron":{"class":"ei","label":"#aaaaaa","default":null,"text":"Intron sequence"}}},"flourishes":{},"expect":[],"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
gtaacattttttcaacttcaccttc..........acaaatgttgttcttttttttatag
2 rna31697-E2 29,796,641 29,797,101 - 0 461
{"provisional":{"expect":[],"seq":[{"style":[2,-52,1]},{"style":[1]},-5,{"style":[1,-40,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"],[7,"cd6839"]]},"legend":{"_messages":[],"exons/Introns":{"utr":{"default":null,"text":"UTR","label":"#cd6839","class":"eu"},"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"},"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"},"intron":{"class":"ei","label":"#aaaaaa","text":"Intron sequence","default":null}}},"flourishes":{}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
GGTATTGAAAGATTGAAGCTTTTTTTCTTGTTTGAAACTTTGTATTCATTGTG ATGTCTC TACCAAGGCTAGGGATAGGTGATGAGGAAAGTAAAAGCAATGTTACTTTGTTGGAAAAAA GTTTGCATTTGAATGGTTCAAAACCAAAAGAGTTCAACTACATGGGATTACCATCCTCTA ATTGTTCATCAGTGGATAGTTCAGTTCCAAAAATTCAATCTTTTAAAGATGAGACCAAAA GTAATTTGAATCTTAAAGCTACTGAGCTTAGATTGGGACTTCCAGGATCACTTTCTCCTG AAAGAGATTCATCAGATTTTTGTTTGAGAAGTTCAAAGCAGTTTGATGAAAAGCCTCTTT TTCCTTTGCACCCTCAAAAAGATGATCATCTTTTTGAATCAAAGCCTGCTGTTTTAGGTA ACAAAAGAGGGTTTTCTGATGCCATGAATGTTTTTTCAGAG
Intron 2-3 29,797,102 29,797,312 211
{"provisional":{"seq":[{"style":[1]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"_messages":[],"exons/Introns":{"utr":{"text":"UTR","default":null,"class":"eu","label":"#cd6839"},"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"},"exon1":{"text":"Translated sequence","default":null,"class":"e1","label":"#1044ee"},"intron":{"default":null,"text":"Intron sequence","class":"ei","label":"#aaaaaa"}}},"flourishes":{}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
gtaagtttttaattcaatcaaaagt..........agttccctccaaattgattatgcag
3 rna31697-E3 29,797,313 29,797,485 0 2 173
{"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"utr":{"class":"eu","label":"#cd6839","text":"UTR","default":null},"flanking":{"class":"ef","label":"#008000","default":null,"text":"Flanking sequence"},"exon1":{"class":"e1","label":"#1044ee","default":null,"text":"Translated sequence"},"intron":{"class":"ei","label":"#aaaaaa","text":"Intron sequence","default":null}}},"flourishes":{},"seq":[{"style":[1]},-1,{"style":[1,-52,0]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
GGGAAATTGAAGCCTAGCTCCAAAATGCTTGAGAATGTTGCCGGGCAGAAAGTGAAAGCC GATGAAATAGCAACAGTTAAGATTGGTCTTGAGAGACCTAATGGTGTTGGTGAAAGCAAA CCAGGTCTTAATGGTTCTGCAAATAATGGAAATAGCACTGCTCCTGCTAGCAA
Intron 3-4 29,797,486 29,797,874 389
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"utr":{"default":null,"text":"UTR","class":"eu","label":"#cd6839"},"flanking":{"label":"#008000","class":"ef","default":null,"text":"Flanking sequence"},"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null},"intron":{"text":"Intron sequence","default":null,"class":"ei","label":"#aaaaaa"}}},"flourishes":{},"seq":[{"style":[1]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
gtaagtagggtggccggtggtgtga..........atgatcgatgaatcttgtggtgcag
4 rna31697-E4 29,797,875 29,798,104 2 1 230
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"utr":{"label":"#cd6839","class":"eu","text":"UTR","default":null},"flanking":{"text":"Flanking sequence","default":null,"class":"ef","label":"#008000"},"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"},"intron":{"label":"#aaaaaa","class":"ei","default":null,"text":"Intron sequence"}}},"flourishes":{},"seq":[{"style":[1]},-2,{"style":[1,-49,0]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
GGCACAGGTTGTTGGTTGGCCTCCAATAAGATCATTTAGGAAAAATTCATTAACAACTGC TTCAAAGAACACTGAAGAGGTTGATGGAAAATTGGGATCAGGAGGTGCAGTGTTTGTGAA GGTTAGCATGGATGGTGCTCCTTATTTAAGAAAAGTAGACTTGAAGAATTACACTGCATA TTCAGAACTATCTTCTTCTCTTGAGAAGATGTTCAGCTGTTTCACCATAG
Intron 4-5 29,798,105 29,798,219 115
{"provisional":{"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"utr":{"default":null,"text":"UTR","class":"eu","label":"#cd6839"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"exon1":{"text":"Translated sequence","default":null,"label":"#1044ee","class":"e1"},"intron":{"default":null,"text":"Intron sequence","label":"#aaaaaa","class":"ei"}}},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"expect":[],"seq":[{"style":[1]}]},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
gtaggtaggaataggttataggtta..........actgcttatgttgatgtgatttcag
5 rna31697-E5 29,798,220 29,798,352 1 2 133
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"utr":{"default":null,"text":"UTR","label":"#cd6839","class":"eu"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"},"intron":{"text":"Intron sequence","default":null,"label":"#aaaaaa","class":"ei"}}},"flourishes":{},"seq":[{"style":[1]},-1,{"style":[1,-12,0]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
GTCAATGTGAATCTCATGGAAACCAGATGCTGAATGAAACCAAGCTGAGGGATCTGCTTC ATGGGTCAGAATATGTTATTACTTATGAGGATAAAGATGGTGATTGGATGCTTGTCGGTG ATGTTCCCTGGGA
Intron 5-6 29,798,353 29,799,377 1,025
{"provisional":{"expect":[],"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"_messages":[],"exons/Introns":{"utr":{"text":"UTR","default":null,"label":"#cd6839","class":"eu"},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null},"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"},"intron":{"label":"#aaaaaa","class":"ei","default":null,"text":"Intron sequence"}}},"flourishes":{}},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
gtaagtttatatacttggttttctt..........cctaatatatctcaactctttgcag
6 rna31697-E6 29,799,378 29,799,439 2 1 62
{"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only","provisional":{"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"utr":{"default":null,"text":"UTR","class":"eu","label":"#cd6839"},"flanking":{"label":"#008000","class":"ef","default":null,"text":"Flanking sequence"},"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null},"intron":{"label":"#aaaaaa","class":"ei","text":"Intron sequence","default":null}}},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},{"style":[1,-1,0]}],"expect":[]}}
GATGTTTATTGATACATGCAGGAGACTAAGAATCATGAAGAGCTCTGATGCCATTGGTTT AG
Intron 6-7 29,799,440 29,799,560 121
{"provisional":{"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"utr":{"class":"eu","label":"#cd6839","default":null,"text":"UTR"},"flanking":{"text":"Flanking sequence","default":null,"class":"ef","label":"#008000"},"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"},"intron":{"class":"ei","label":"#aaaaaa","default":null,"text":"Intron sequence"}}},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"expect":[],"seq":[{"style":[1]}]},"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only"}
gttagtattccattcatttaacacc..........ttatgtgttgtggtccattttgcag
7 rna31697-E7 29,799,561 29,800,116 1 - 556
{"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"utr":{"text":"UTR","default":null,"class":"eu","label":"#cd6839"},"flanking":{"text":"Flanking sequence","default":null,"label":"#008000","class":"ef"},"exon1":{"default":null,"text":"Translated sequence","class":"e1","label":"#1044ee"},"intron":{"default":null,"text":"Intron sequence","class":"ei","label":"#aaaaaa"}}},"flourishes":{},"seq":[{"style":[1,-37,2]},{"style":[2]},-7,{"style":[2,-15,0]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"],[7,"cd6839"]]}}}
CCCCCAGAGCAGTTGAAAAAAGTAAAAGCAGGAACTAAGCAGTAAGCAGTATCAATAATG GTCACACACACTCTATCTATCTAACTGTCTATGGTGTGAAAATGTTTCAGTTTTTTTGTT TTTATTATTGTCACAATTTATATAATCCCTAAGACATTTTAGTGTGAAAGATTCTTATAT GTCCTGTTGTGAAGGATTAGTGTGTGAAACTGTGAAATATTGCATTATATATGTTTGTGG CTTTGTGTGTTGTTGAAAACAAAAAACTGTTTAACTTAATATGGAATGTAACTTTTACAG TTTCTATGACACTGTTTTTAACTTTTGTTACATGTCTATGTCATTCACCTGTTGCATATA GTAGTTAGGTGTTGGCAAGAACTGACACAAAAAAGGTTGAATTCCCATAGTTTAGAGTTG GTATAATAATTTTTATGATCACATTTTTACCCAAACAGTGGTCCCCAACTTGTAACCATT CTGAATATGGAACAAGATTCTAGTATGACACTTTGAAACGATTAAAATTAAAATAGACGA ATTCATATTTTAGGCT
3' downstream sequence
{"url":"/Medicago_truncatula/Component/Transcript/Exons/exons?g=gene31697;r=CM010652.10X0P+029795974-29800116;t=rna31697;db=core;time=1755923691582.582;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"utr":{"text":"UTR","default":null,"label":"#cd6839","class":"eu"},"flanking":{"label":"#008000","class":"ef","default":null,"text":"Flanking sequence"},"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"},"intron":{"text":"Intron sequence","default":null,"label":"#aaaaaa","class":"ei"}}},"flourishes":{},"seq":[{"style":[1]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#008000"]]}}}
cgatattttagattttacaaaaaaataaaaaaattgcatattttatgata..........
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