Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: rna18664

.

Description

putative F-box domain-containing protein

Location

Primary_assembly CM010650.1: 48,866,833-48,876,814 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene gene18664 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	rna18664	2619	535aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G7J3V2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	23	69	-	1.20.1280.50	-
PANTHER	26	531	-	PTHR14939	-
CDD	29	61	-	cd09917	-
Pfam	29	62	F-box domain	PF00646	IPR001810 [Display all genes with this domain]
SMART	29	69	F-box domain	SM00256	IPR001810 [Display all genes with this domain]
Superfamily	21	61	F-box-like domain superfamily	SSF81383	IPR036047 [Display all genes with this domain]
SMART	342	498	FIST, C-domain	SM01204	IPR019494 [Display all genes with this domain]

Other features

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
Seg	7	19
Alphafold	1	535

.

Personal Data