Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: rna16883

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Description

putative aminoacyltransferase, E1 ubiquitin-activating enzyme

Location

Primary_assembly CM010650.1: 36,172,394-36,174,942 reverse strand.

About this transcript

This transcript has 2 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene gene16883 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	rna16883	1670	338aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A072UZH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	117	266	-	PTHR15710	-
Superfamily	202	268	-	SSF57850	-
CDD	221	262	-	cd16667	-
Pfam	18	52	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PF14369	IPR039525 [Display all genes with this domain]
Pfam	220	262	Zinc finger, RING-type	PF13639	IPR001841 [Display all genes with this domain]
SMART	221	261	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	221	262	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
Gene3D	184	268	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	88	126
MobiDBLite	310	338
Seg	270	285
Alphafold	1	338

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