Leersia perrieri (Lperr_V1.4) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 2: 6,643,953-6,649,908 forward strand.
This transcript has 6 exons and is annotated with 36 domains and features.
This transcript is a product of gene LPERR02G09080 Show transcript tableHide transcript table
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| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........tccaggtttcaagagtccaaactcggttccgctacttcgctgccgtagta
| ||||||
| 1 | LPERR02G09080.1.exon1 | 6,643,953 | 6,645,993 | - | 0 | 2,041 |
TATACACCATCCATCGGATTCCAACGGCCACGATTACACGTGCGCCACCGCCTCCTCTTT TTTCCCCCTTTCTTTCTCTCGTCGTCACCTCACCTCCCAAACCCAAACACAAAAAAAATC GCGACCTGACCCGACCGCACCGCCGCCACCCACCTCCACCGCCATAGCCAGCCGCTGAAG CTCCAATCCGATTCGGCCCCCGCGGATTCCGGTAGGGTTTCGCGCGAATCCCTCGCCGCG GCTGATCTGGGCGTCGCGGGGGGACCGGATTTGGGGGTTTTGTTTGGTTTATTTATGCAT GGCTTCGTCCCCTCCTGGCGCCGGCGTCGGCGGGGAGGAGCCCGCGGCGAGCCCGGCACC GCCGGCGGTGGCGGCGGAGGCGGCGGAAGAGCCGGTGACGTCGCGGTGGGCGCCGGAGAT TAGGGTGTACAAGCGCAAGTACCCCAACAAAAACCCTAAACCCCCTCCTCCGAACCCTAG CCCTAATTCCAGCCCCCTCGCGCAAACCCTAGCTTCGATTCGGAGGTCGATTCGCCGCCC CGAGGATGGGTCTGCGCCGCCACGGCCTGATCCGTCGCCGGCCGCTGCGCCTGCTACCTC GTCCCCTCCTCCTTCTCCCCCGTCCGCCCCCGCGCAGCAGGGTGAGCCGCCCGCAGCTTC CGGTGATGTCTCCATGGGGGCTAATCCGGACGGTGGGGCTGTTCCCAATGGCCATGGAGA CGTCCGGGCGGCCGCTGAAGAGAAGGCACGGAAGCGGAAGGCGCGGAGCGAGCTGCGACG GCAGCTTGCGTCGGAGCTCGACCAGGTGCGTGGGCTTTCTAAGCGGCTGAAGGCCATTGC TGAGGCCATGGCGGCTGAGTCTGCGTTAGCACTTGCTTTGCCTGCGCCGCCGCCGCCGCC TCAGCCGCCTGTTGTGTATACGCACTCGCAGTATGCACTCGCTGACCCTGTGACCCCCAT ACCTGGACAAGTTGCTGCCGCTGTTGGTCCGGTCCGCTCAGTGTTGCAGCGCGGGCCACT AACCGTGTCAGTGACTCACACAGAACCCTTCGAGAAGGAGAAGCGGACACCAAAGGCGAA TCAGTTGTATCAAAATTCAGAGTTTTTGCTTGCCAAGGATAAGTTTCCGCCTGCAGATTC ACATGGTCGTAAGAAATCCAAGCACCACAAGAAGAAGCATCGTTCCTTGGCAGCTGGCTC TGGTTATGATGCTGAGCAGAGGCTCTACTCTCACGCTTTTAAGAAATCTCAGTCCCTTCT TTCTAGGCTAATGAAACACAAATTTGGTTGGGTCTTTAACAAGCCTGTAGATGCTGTTGC GCTTGGTCTGCATGACTATTTTGCTATTATCAAGCGCCCAATGGATCTTGGCACGATAAA GACCCGTCTCACACATGGCCAGTACAGGACTCCAAGGGAGTTTGCTGAAGATGTACGGCT AACGTTCCATAATGCCATGACCTACAATCCCAAGGGGCAGGATGTGCATTTCATGGCTGA GCAGTTGTTAGGAATCTTTGAGGCGCAGTGGCCTGAAATTGAGGCTGAGGTTCAGTACCT TGCCTCATGTCCACCGTTGCCAAATAAGTTTCCACCTCCACCAGTTCAAGTGCTCTTTGA CAGATCAGATTCTATGAAACACAATATGGCGTTGGACTCCAAGTCAAGGCCAATAAGTCA TACTCCCACCTATAGTGCCAGGACTCCATCAATGAAGAAACCAAAGGCAAAGGATCTGGA TAAGAGAGATATGACCATAGATGAGAAGCGGAAGCTTAGTAACAACCTTCAGAATTTGCC CCCAGAGAAGCTTGATGTTGTTGTGCAGATTATAAAAAACAAGAATCTTTCTGTTATGCA TCATGATGATGAGATTGAGGTTGAAATAGATAGCATGGATGCTGAGACACTTTGGGAACT TGATAGATTTGTGGCCAACTATAAGAAAAACCTGAGTAAGCAAAAGAGGAAGGCTGAGCG TGCAATGCTTGCAAGACAGGATGCAGAGTTGCGTGCAGAACATGTTGCACCACAACAACC A |
| Intron 1-2 | 6,645,994 | 6,646,087 | 94 |
gtatgtgcattcaatcacttgtatt..........gtactgacagtttcttggattgcag
| |||
| 2 | LPERR02G09080.1.exon2 | 6,646,088 | 6,646,127 | 0 | 1 | 40 |
AGCCAAGAACCTAATATTGGTGTCAAATCTCCGAAACAAA
|
| Intron 2-3 | 6,646,128 | 6,646,239 | 112 |
gtaagtgatatatttgctctttttt..........atagtaattttactttttttagtag
| |||
| 3 | LPERR02G09080.1.exon3 | 6,646,240 | 6,646,308 | 1 | 1 | 69 |
ATTTGACGGCGGATGAGCAATTAGCTACTTCTGTGCCAGAACAAAATGATAATAATGGAC AAAATGCAA |
| Intron 3-4 | 6,646,309 | 6,646,312 | 4 |
gtag
| |||
| 4 | LPERR02G09080.1.exon4 | 6,646,313 | 6,646,362 | 1 | 0 | 50 |
ATCGAGCAGCTCTAGCAGCTCCAGCAGTGATTCAGGATCCTCTTCTAGTG
|
| Intron 4-5 | 6,646,363 | 6,646,475 | 113 |
gtaatatttctttctgtcttggctt..........attaattaatattcttttttggcag
| |||
| 5 | LPERR02G09080.1.exon5 | 6,646,476 | 6,646,538 | 0 | 0 | 63 |
ACTCAGACAGTGATAGCTCCTCTTCAGATGGATCAGATGCTGCCAATTCATCTTGAAATG CAG |
| Intron 5-6 | 6,646,539 | 6,649,890 | 3,352 |
gtaggttttatcaattgttttttgt..........tgcttatgtgtacttatgattgtag
| |||
| 6 | LPERR02G09080.1.exon6 | 6,649,891 | 6,649,908 | 0 | 0 | 18 |
GTTAACTTTGTACACTAG
|
| 3' downstream sequence |
tccattttcatttgtttggcagcagagtgcagctgtatttaatgcacctt..........
|
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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