Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: LPERR09G05040.1

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Location

Chromosome 9: 6,948,546-6,953,544 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 35 domains and features.

Gene

This transcript is a product of gene LPERR09G05040 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	LPERR09G05040.1	4278	1203aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9XCY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PROSITE profiles	619	1203	Histone H3-K9 methyltransferase, plant	PS51575	IPR025794 [Display all genes with this domain]
PANTHER	597	1198	Histone-lysine N-methyltransferase SUVAR3-9	PTHR45660	IPR051357 [Display all genes with this domain]
Superfamily	739	918	PUA-like superfamily	SSF88697	IPR015947 [Display all genes with this domain]
PROSITE profiles	1187	1203	Post-SET domain	PS50868	IPR003616 [Display all genes with this domain]
SMART	929	1020	Pre-SET domain	SM00468	IPR007728 [Display all genes with this domain]
Pfam	933	1028	Pre-SET domain	PF05033	IPR007728 [Display all genes with this domain]
PROSITE profiles	973	1033	Pre-SET domain	PS50867	IPR007728 [Display all genes with this domain]
PROSITE profiles	1036	1173	SET domain	PS50280	IPR001214 [Display all genes with this domain]
SMART	1036	1179	SET domain	SM00317	IPR001214 [Display all genes with this domain]
Pfam	1047	1173	SET domain	PF00856	IPR001214 [Display all genes with this domain]
Superfamily	915	1182	SET domain superfamily	SSF82199	IPR046341 [Display all genes with this domain]
Gene3D	923	1203	SET domain superfamily	2.170.270.10	IPR046341 [Display all genes with this domain]
SMART	748	907	SRA-YDG	SM00466	IPR003105 [Display all genes with this domain]
Pfam	752	907	SRA-YDG	PF02182	IPR003105 [Display all genes with this domain]
PROSITE profiles	753	903	SRA-YDG	PS51015	IPR003105 [Display all genes with this domain]
Gene3D	735	922	SRA-YDG superfamily	2.30.280.10	IPR036987 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	494	539
MobiDBLite	511	524
MobiDBLite	525	539
MobiDBLite	546	565
MobiDBLite	590	672
MobiDBLite	606	618
MobiDBLite	619	628
MobiDBLite	639	648
Phobius	1	11
Phobius	12	38
Phobius	39	1203
Seg	12	22
Seg	47	69
Seg	90	98
Seg	99	119
Seg	142	157
Seg	1052	1060
TMHMM	5	27
Alphafold	1	1203

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