Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: LPERR08G16360.2

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Location

Chromosome 8: 17,083,496-17,087,456 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene LPERR08G16360 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	LPERR08G16360.1	2288	658aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9X9E4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	LPERR08G16360.2	2270	652aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9X9E5	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	7	652	-	PTHR47796	-
Gene3D	8	99	-	3.10.20.90	-
Gene3D	546	647	-	1.20.58.2190	-
CDD	549	649	-	cd10463	-
SMART	564	633	-	SM00580	-
Pfam	562	638	PUB domain	PF09409	IPR018997 [Display all genes with this domain]
Superfamily	543	649	PUB-like domain superfamily	SSF143503	IPR036339 [Display all genes with this domain]
Superfamily	13	98	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]
PROSITE profiles	139	330	WLM domain	PS51397	IPR013536 [Display all genes with this domain]
Pfam	157	329	WLM domain	PF08325	IPR013536 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	387	413
MobiDBLite	425	452
MobiDBLite	504	524
Seg	302	325
Seg	371	378
Alphafold	1	652

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