Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: LPERR07G22000.3

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Location

Chromosome 7: 20,792,772-20,795,028 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene LPERR07G22000 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	LPERR07G22000.2	2514	529aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9X2I1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	LPERR07G22000.1	3212	435aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9X2I0	-
-	LPERR07G22000.3	1110	369aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9X2I2	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	25	306	-	PTHR48125	-
Gene3D	299	366	-	3.90.70.10	-
Superfamily	311	353	Papain-like cysteine peptidase superfamily	SSF54001	IPR038765 [Display all genes with this domain]
Pfam	317	350	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PF00443	IPR001394 [Display all genes with this domain]
PROSITE patterns	317	332	Ubiquitin specific protease, conserved site	PS00972	IPR018200 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	1	28
MobiDBLite	1	65
MobiDBLite	41	56
Seg	39	64
Seg	77	94
Alphafold	1	369

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