Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: LPERR04G21400.1

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Location

Chromosome 4: 19,983,502-19,985,070 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene LPERR04G21400 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	LPERR04G21400.1	1389	462aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9W9Q1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	55	453	-	PTHR45926	-
SMART	118	228	Bromodomain	SM00297	IPR001487 [Display all genes with this domain]
Pfam	129	210	Bromodomain	PF00439	IPR001487 [Display all genes with this domain]
PROSITE profiles	137	209	Bromodomain	PS50014	IPR001487 [Display all genes with this domain]
Prints	156	172	Bromodomain	PR00503	IPR001487 [Display all genes with this domain]
Prints	172	190	Bromodomain	PR00503	IPR001487 [Display all genes with this domain]
Prints	190	209	Bromodomain	PR00503	IPR001487 [Display all genes with this domain]
Superfamily	111	233	Bromodomain-like superfamily	SSF47370	IPR036427 [Display all genes with this domain]
Gene3D	117	237	Bromodomain-like superfamily	1.20.920.10	IPR036427 [Display all genes with this domain]
PROSITE profiles	270	351	NET domain	PS51525	IPR027353 [Display all genes with this domain]
Pfam	279	341	NET domain	PF17035	IPR027353 [Display all genes with this domain]
Gene3D	273	351	NET domain superfamily	1.20.1270.220	IPR038336 [Display all genes with this domain]
CDD	125	223	Putative transcription factor GTE, bromodomain	cd05506	IPR037377 [Display all genes with this domain]

Other features

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Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
MobiDBLite	1	51
MobiDBLite	90	117
MobiDBLite	96	108
MobiDBLite	252	275
MobiDBLite	431	462
MobiDBLite	434	455
Seg	90	95
Seg	98	119
Seg	237	256
Seg	430	455
Alphafold	1	462
Ncoils	79	99

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