Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: LPERR03G21970.1

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Location

Chromosome 3: 19,103,829-19,111,591 forward strand.

About this transcript

This transcript has 14 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene LPERR03G21970 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	LPERR03G21970.1	2131	563aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VWI8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	197	229	-	SSF57716	-
Gene3D	197	251	-	2.10.110.10	-
CDD	204	243	-	cd09396	-
PANTHER	82	562	Protein DA1-like	PTHR24209	IPR045218 [Display all genes with this domain]
Pfam	344	556	Protein DA1-like domain	PF12315	IPR022087 [Display all genes with this domain]
SMART	121	140	Ubiquitin interacting motif	SM00726	IPR003903 [Display all genes with this domain]
SMART	155	174	Ubiquitin interacting motif	SM00726	IPR003903 [Display all genes with this domain]
PROSITE profiles	156	174	Ubiquitin interacting motif	PS50330	IPR003903 [Display all genes with this domain]
PROSITE profiles	202	263	Zinc finger, LIM-type	PS50023	IPR001781 [Display all genes with this domain]
SMART	203	251	Zinc finger, LIM-type	SM00132	IPR001781 [Display all genes with this domain]
PROSITE patterns	204	238	Zinc finger, LIM-type	PS00478	IPR001781 [Display all genes with this domain]
Pfam	204	245	Zinc finger, LIM-type	PF00412	IPR001781 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Seg	13	33
Seg	474	504
SignalP	1	18
Alphafold	1	563

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