Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: LPERR02G06100.1

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Location

Chromosome 2: 4,139,725-4,154,003 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 27 domains and features.

Gene

This transcript is a product of gene LPERR02G06100 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	LPERR02G06100.1	6860	1871aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VD83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	51	700	-	PTHR47162	-
Gene3D	161	441	-	3.30.160.360	-
CDD	1007	1052	-	cd15519	-
PROSITE profiles	898	946	Bromodomain	PS50014	IPR001487 [Display all genes with this domain]
Superfamily	844	961	Bromodomain-like superfamily	SSF47370	IPR036427 [Display all genes with this domain]
Gene3D	848	969	Bromodomain-like superfamily	1.20.920.10	IPR036427 [Display all genes with this domain]
PROSITE profiles	302	447	FY-rich, C-terminal	PS51543	IPR003889 [Display all genes with this domain]
PROSITE profiles	160	213	FY-rich, N-terminal	PS51542	IPR003888 [Display all genes with this domain]
Pfam	1085	1129	WHIM1 domain	PF15612	IPR028942 [Display all genes with this domain]
Superfamily	996	1058	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	1005	1055	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
Pfam	1008	1052	Zinc finger, PHD-finger	PF00628	IPR019787 [Display all genes with this domain]
SMART	1007	1053	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
PROSITE patterns	1008	1052	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
Gene3D	970	1066	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	85	106
MobiDBLite	1283	1321
MobiDBLite	1298	1316
MobiDBLite	1546	1583
MobiDBLite	1672	1690
MobiDBLite	1672	1717
MobiDBLite	1691	1714
MobiDBLite	1848	1871
MobiDBLite	1855	1871
Seg	874	883
Seg	1854	1864
Ncoils	1323	1343

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