Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: LPERR02G01570.1

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Location

Chromosome 2: 968,787-970,767 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 18 domains and features.

Gene

This transcript is a product of gene LPERR02G01570 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	LPERR02G01570.1	1351	354aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VBJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	217	354	-	cd10539	-
PANTHER	29	354	Histone-lysine N-methyltransferase ATXR5/ATXR6	PTHR48442	IPR053114 [Display all genes with this domain]
PROSITE profiles	220	342	SET domain	PS50280	IPR001214 [Display all genes with this domain]
Pfam	231	342	SET domain	PF00856	IPR001214 [Display all genes with this domain]
Gene3D	124	354	SET domain superfamily	2.170.270.10	IPR046341 [Display all genes with this domain]
Superfamily	212	344	SET domain superfamily	SSF82199	IPR046341 [Display all genes with this domain]
Superfamily	19	79	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	26	76	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
Pfam	29	73	Zinc finger, PHD-finger	PF00628	IPR019787 [Display all genes with this domain]
SMART	28	74	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
PROSITE patterns	29	73	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
Gene3D	5	87	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	1	25
Seg	3	26
Seg	71	90
Seg	110	120
Seg	160	167
Alphafold	1	354

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