Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: LPERR02G01130.1

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Location

Chromosome 2: 697,529-703,677 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 22 domains and features.

Gene

This transcript is a product of gene LPERR02G01130 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	LPERR02G01130.1	2619	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VBD8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	700	863	-	3.10.20.90	-
Pfam	515	608	Autophagy protein ATG5, UblA domain	PF20638	IPR048939 [Display all genes with this domain]
Pfam	712	859	Autophagy protein ATG5, UblB domain	PF04106	IPR048318 [Display all genes with this domain]
Pfam	622	678	Autophagy protein ATG5, alpha-helical bundle region	PF20637	IPR048940 [Display all genes with this domain]
Gene3D	508	611	Autophagy protein Atg5, UblA domain	3.10.20.620	IPR042527 [Display all genes with this domain]
Gene3D	612	679	Autophagy protein Atg5, helix rich domain	1.10.246.190	IPR042526 [Display all genes with this domain]
PANTHER	508	861	Autophagy-related protein 5	PTHR13040	IPR007239 [Display all genes with this domain]
Pfam	96	386	Trichome birefringence-like, C-terminal domain	PF13839	IPR026057 [Display all genes with this domain]
Pfam	42	91	Trichome birefringence-like, N-terminal domain	PF14416	IPR025846 [Display all genes with this domain]

Other features

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Feature type
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End

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Feature type	Start	End
MobiDBLite	450	481
MobiDBLite	453	471
MobiDBLite	691	710
MobiDBLite	777	797
Seg	2	35
Seg	50	65
Seg	98	115
Seg	138	151
Seg	413	430
Seg	491	520
Seg	532	545
SignalP	1	19
Alphafold	1	872

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