Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: LPERR03G01580

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Location

Chromosome 3: 1,070,824-1,082,702 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 155 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	LPERR03G01580.1	5868	1955aa	LPERR03G01580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VNT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	LPERR03G01580.4	5700	1899aa	LPERR03G01580.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VNU2	-
-	LPERR03G01580.5	5664	1887aa	LPERR03G01580.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VNU3	-
-	LPERR03G01580.3	5619	1872aa	LPERR03G01580.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VNU1	-
-	LPERR03G01580.2	5541	1846aa	LPERR03G01580.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VNU0	-
-	LPERR03G01580.6	5256	1751aa	LPERR03G01580.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D9VNU4	-

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Rice cultivars

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data