Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: CMH262C

.

Description

TATA-box binding protein-associated factor 1 [Source:UniProtKB/TrEMBL;Acc:M1UQU4]

Location

Chromosome 8: 677,032-682,347 forward strand.

About this gene

This gene has 1 transcript (splice variant), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	CMH262CT	5316	1771aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1UQU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Paralogues

.

Download paralogues

Type	Ancestral taxonomy	Ensembl identifier & gene name	Compare	Location	Percentage of the paralogous sequence matching the query sequenceTarget %id	Percentage of the query sequence matching the sequence of the paralogueQuery %id
Genes (homologues) that have evolved by duplication.Paralogues	Cyanidioschyzon merolae	CMA025C No description	Region Comparison Alignment (protein) Alignment (cDNA)	1:73,860-75,189:-1	26.24 %	6.55 %

.

Personal Data