EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Brassica rapa (Brapa_1.0)
Description

AT5G08390 (E=2e-222) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G23430.1); Has 84267 Blast hits to 30722 proteins in 748 species: Archae - 68; Bacteria - 7813; Metazoa - 39755; Fungi - 16342; Plants - 8110; Viruses - 6; Other Eukaryotes - 12173 (source: NCBI BLink).

Location
About this transcript

This transcript has 18 exons and is annotated with 42 domains and features.

Gene

This transcript is a product of gene Bra005990 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeRefSeqFlags
-Bra005990.12547848aaBra005990.1-P
 
Protein coding
-Ensembl Canonical
Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,547 bps, Translation length: 848 residues

Version

Bra005990.1

Type

Protein coding

Annotation Method

Gene models predicted using GLEAN.Information provided by BRAD.