Transcript: Bra009121.1
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Description
AT5G05610 (E=6e-108) AL1 | AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding
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- Bra009121.1 723 240aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M4CY24 A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical,
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Codons Alternating codons Alternating codons Exons Variants Other Markup ▼ ▲
1 ATG GCT GGC GAG TCC TCT AAT CCT GGC ACC GTC GAA GAG ATC TTC AAG GAT TTT AGA GGT 60
1 ATGGCTGGCGAGTCCTCTAATCCTGGCACCGTCGAAGAGATCTTCAAGGATTTTAGAGGT 60
1 -M--A--G--E--S--S--N--P--G--T--V--E--E--I--F--K--D--F--R--G- 20
61 CGT CGC TCT GCT TTT CTT CAA GCT CTC TCC GTA G A T GTT GAC AAG TTC TAC TCT TTA TGC 120
61 CGTCGCTCTGCTTTTCTTCAAGCTCTCTCCGTAGATGTTGACAAGTTCTACTCTTTATGC 120
21 -R--R--S--A--F--L--Q--A--L--S--V--D--V--D--K--F--Y--S--L--C- 40
121 AAT CCT G A A ATG GAG AAT CTG TGT TTG TAT GGA CAC CCG AAT GGG ACG TGG GAA GTG AAT 180
121 AATCCTGAAATGGAGAATCTGTGTTTGTATGGACACCCGAATGGGACGTGGGAAGTGAAT 180
41 -N--P--E--M--E--N--L--C--L--Y--G--H--P--N--G--T--W--E--V--N- 60
181 CTT CCA GCG GAG GAA GTG CCT CCT GAG CTT CCA GAG CCA GCG CTT GGA ATC AAT TTC GCA 240
181 CTTCCAGCGGAGGAAGTGCCTCCTGAGCTTCCAGAGCCAGCGCTTGGAATCAATTTCGCA 240
61 -L--P--A--E--E--V--P--P--E--L--P--E--P--A--L--G--I--N--F--A- 80
241 AGA GAT GGC ATG CAG CGT CAA GAT TGG CTC TCC TTA GTT GCT GTC CAC AGT GAT TGT TGG 300
241 AGAGATGGCATGCAGCGTCAAGATTGGCTCTCCTTAGTTGCTGTCCACAGTGATTGTTGG 300
81 -R--D--G--M--Q--R--Q--D--W--L--S--L--V--A--V--H--S--D--C--W- 100
301 TTG CTC TCT GTT TCC TCC TAC TTT GGC GCT CGG CTT AGT CGC AAT GAG AA G AAT CGC CTA 360
301 TTGCTCTCTGTTTCCTCCTACTTTGGCGCTCGGCTTAGTCGCAATGAGAAGAATCGCCTA 360
101 -L--L--S--V--S--S--Y--F--G--A--R--L--S--R--N--E--K--N--R--L- 120
361 TTC AGT CTG ATC AAC GAT CTT CCA ACT CTC TTT GAA GTA GTG ACC GGT AGG AAG ACC ATC 420
361 TTCAGTCTGATCAACGATCTTCCAACTCTCTTTGAAGTAGTGACCGGTAGGAAGACCATC 420
121 -F--S--L--I--N--D--L--P--T--L--F--E--V--V--T--G--R--K--T--I- 140
421 AAA GAT AAA CCA AGC ATG GAT CAT GAG AGC AAA TAC CAA AAC GGC TTA AAG AGA TCA ATT 480
421 AAAGATAAACCAAGCATGGATCATGAGAGCAAATACCAAAACGGCTTAAAGAGATCAATT 480
141 -K--D--K--P--S--M--D--H--E--S--K--Y--Q--N--G--L--K--R--S--I- 160
481 GAA GGA GAG ATG AAG ATC ACA AGG AAG TTA ATG GAA GAG AGC TGC GAA GAC GAA GAA GAC 540
481 GAAGGAGAGATGAAGATCACAAGGAAGTTAATGGAAGAGAGCTGCGAAGACGAAGAAGAC 540
161 -E--G--E--M--K--I--T--R--K--L--M--E--E--S--C--E--D--E--E--D- 180
541 GAG CAT GGA GAT ACA CTA TGT GGA AGC TGT GGA GGA CAC TAC CTA AAC GTC GAG TTC TGG 600
541 GAGCATGGAGATACACTATGTGGAAGCTGTGGAGGACACTACCTAAACGTCGAGTTCTGG 600
181 -E--H--G--D--T--L--C--G--S--C--G--G--H--Y--L--N--V--E--F--W- 200
601 ATA TGT TGT GAT GTA TGT GAA CGT TGG TAC CAT GGA AAG TGT GTG AAG ATA ACA CCA GCC 660
601 ATATGTTGTGATGTATGTGAACGTTGGTACCATGGAAAGTGTGTGAAGATAACACCAGCC 660
201 -I--C--C--D--V--C--E--R--W--Y--H--G--K--C--V--K--I--T--P--A- 220
661 AAA GCA GAG AGC ATG AAG CAG TAC AAA TGC CCT TCT TGC TGC ACT AAG AAA GGA AGA CAG 720
661 AAAGCAGAGAGCATGAAGCAGTACAAATGCCCTTCTTGCTGCACTAAGAAAGGAAGACAG 720
221 -K--A--E--S--M--K--Q--Y--K--C--P--S--C--C--T--K--K--G--R--Q- 240
721 TGA 723
721 TGA 723
-*- 240
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