Transcript: Bra005362.1
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Description
AT2G35160 (E=1e-166) SUVH5, SGD9 | SUVH5 (SU(VAR)3-9 HOMOLOG 5); histone methyltransferase
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- Bra005362.1 1230 409aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M4CMC4 A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical,
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1 ATGAGAGACGCCAACAAGGAGCTGCTCGCCGTGAGTATAGTAGCCTCTGGTGGCTACGAC 60
1 ATGAGAGACGCCAACAAGGAGCTGCTCGCCGTGAGTATAGTAGCCTCTGGTGGCTACGAC 60
1 -M--R--D--A--N--K--E--L--L--A--V--S--I--V--A--S--G--G--Y--D- 20
61 GACGACCTTTGTAACTCCGACGTGTTGATCTACACAGGCCAAGGAGGGAACCTATCTAAA 120
61 GACGACCTTTGTAACTCCGACGTGTTGATCTACACAGGCCAAGGAGGGAACCTATCTAAA 120
21 -D--D--L--C--N--S--D--V--L--I--Y--T--G--Q--G--G--N--L--S--K- 40
121 AAGTTTCAACAGGGGAACATAACCAACGAACCTAAAGACCAGCAGCTCTTGAGAGGAAAC 180
121 AAGTTTCAACAGGGGAACATAACCAACGAACCTAAAGACCAGCAGCTCTTGAGAGGAAAC 180
41 -K--F--Q--Q--G--N--I--T--N--E--P--K--D--Q--Q--L--L--R--G--N- 60
181 CTCGCGTTGGCGAACAGTATAGACAAACAGAACCCTGTGAGGGTCATAAGAGGCAACAAG 240
181 CTCGCGTTGGCGAACAGTATAGACAAACAGAACCCTGTGAGGGTCATAAGAGGCAACAAG 240
61 -L--A--L--A--N--S--I--D--K--Q--N--P--V--R--V--I--R--G--N--K- 80
241 AAGACACCATCTTCTGATAATAACACCAAAAACTACGTCTACGATGGGTTGTATCTGGTT 300
241 AAGACACCATCTTCTGATAATAACACCAAAAACTACGTCTACGATGGGTTGTATCTGGTT 300
81 -K--T--P--S--S--D--N--N--T--K--N--Y--V--Y--D--G--L--Y--L--V- 100
301 GAAGAGTTTTGGAAAGAAGTGGGATCTTATGGTAAGCTTGTTTTTAAGTTCAGGCTGCGG 360
301 GAAGAGTTTTGGAAAGAAGTGGGATCTTATGGTAAGCTTGTTTTTAAGTTCAGGCTGCGG 360
101 -E--E--F--W--K--E--V--G--S--Y--G--K--L--V--F--K--F--R--L--R- 120
361 CGTATCGCCGGGCAGCCTGAACTTACTTGGAAAGTGGTTAAGAAAGCAAAATCATCAAAG 420
361 CGTATCGCCGGGCAGCCTGAACTTACTTGGAAAGTGGTTAAGAAAGCAAAATCATCAAAG 420
121 -R--I--A--G--Q--P--E--L--T--W--K--V--V--K--K--A--K--S--S--K- 140
421 GCTCGCGACGGTCTCTGCTGCGAAGATATCTCTGGAGGGAAAGAGAGGTTGCCTATATGC 480
421 GCTCGCGACGGTCTCTGCTGCGAAGATATCTCTGGAGGGAAAGAGAGGTTGCCTATATGC 480
141 -A--R--D--G--L--C--C--E--D--I--S--G--G--K--E--R--L--P--I--C- 160
481 GCTGTTAACGAGATAGACGATGAGAAACCTCCTGTGTTTGACTACACTGTTAACATGATA 540
481 GCTGTTAACGAGATAGACGATGAGAAACCTCCTGTGTTTGACTACACTGTTAACATGATA 540
161 -A--V--N--E--I--D--D--E--K--P--P--V--F--D--Y--T--V--N--M--I- 180
541 TATCCGGATTGGTGCCAGCCGATTCCTCCGAAAGGTTGCGGCTGCACGAAGGGCTGCAAA 600
541 TATCCGGATTGGTGCCAGCCGATTCCTCCGAAAGGTTGCGGCTGCACGAAGGGCTGCAAA 600
181 -Y--P--D--W--C--Q--P--I--P--P--K--G--C--G--C--T--K--G--C--K- 200
601 GACTCGAAAAACTGCGGTTGCGTTGCGAAAAACGACGGAGAGTTGCCGTATAACTACGAC 660
601 GACTCGAAAAACTGCGGTTGCGTTGCGAAAAACGACGGAGAGTTGCCGTATAACTACGAC 660
201 -D--S--K--N--C--G--C--V--A--K--N--D--G--E--L--P--Y--N--Y--D- 220
661 GGAGCGATTGTTTTTAGAAAGCCTATGGTCTACGAGTGTGGCCCTCTCTGCAAATGCCCG 720
661 GGAGCGATTGTTTTTAGAAAGCCTATGGTCTACGAGTGTGGCCCTCTCTGCAAATGCCCG 720
221 -G--A--I--V--F--R--K--P--M--V--Y--E--C--G--P--L--C--K--C--P- 240
721 CCTGATTGCTACCTCCGCGTCACGCAGAGAGGGATCAAGATCCAGCTGGAGATCTTCAAG 780
721 CCTGATTGCTACCTCCGCGTCACGCAGAGAGGGATCAAGATCCAGCTGGAGATCTTCAAG 780
241 -P--D--C--Y--L--R--V--T--Q--R--G--I--K--I--Q--L--E--I--F--K- 260
781 ACCGAGTCGAGAGGATGGGGAGTGAGGTCTCTAGAGTCTATTCCTTCGGGGAGCTTCATC 840
781 ACCGAGTCGAGAGGATGGGGAGTGAGGTCTCTAGAGTCTATTCCTTCGGGGAGCTTCATC 840
261 -T--E--S--R--G--W--G--V--R--S--L--E--S--I--P--S--G--S--F--I- 280
841 TGCGAGTACGCAGGGGAGCTTCTACAGGAAAACGAAGCTGATAGGCTTGCGGGTAAAGAC 900
841 TGCGAGTACGCAGGGGAGCTTCTACAGGAAAACGAAGCTGATAGGCTTGCGGGTAAAGAC 900
281 -C--E--Y--A--G--E--L--L--Q--E--N--E--A--D--R--L--A--G--K--D- 300
901 GAGTATCTATTTGACATTGGGACTGATAATGGGAGTAGTAGCTTCTATGAGAGCAGCTTC 960
901 GAGTATCTATTTGACATTGGGACTGATAATGGGAGTAGTAGCTTCTATGAGAGCAGCTTC 960
301 -E--Y--L--F--D--I--G--T--D--N--G--S--S--S--F--Y--E--S--S--F- 320
961 TTTACCATAGACGCTGCGAGGAAAGGGAACGTAGGGAGGTTTATAAACCATAGCTGCTCG 1020
961 TTTACCATAGACGCTGCGAGGAAAGGGAACGTAGGGAGGTTTATAAACCATAGCTGCTCG 1020
321 -F--T--I--D--A--A--R--K--G--N--V--G--R--F--I--N--H--S--C--S- 340
1021 CCGAATCTGTACGCGCAAGATGTTTTGTACCACCATGAGGATATGAGGATCCCTCATGTG 1080
1021 CCGAATCTGTACGCGCAAGATGTTTTGTACCACCATGAGGATATGAGGATCCCTCATGTG 1080
341 -P--N--L--Y--A--Q--D--V--L--Y--H--H--E--D--M--R--I--P--H--V- 360
1081 ATGCTCTTTGCGAAGGACAATATACCTCCGCTTAAGGAACTAACGTACTATTACAACTAT 1140
1081 ATGCTCTTTGCGAAGGACAATATACCTCCGCTTAAGGAACTAACGTACTATTACAACTAT 1140
361 -M--L--F--A--K--D--N--I--P--P--L--K--E--L--T--Y--Y--Y--N--Y- 380
1141 AAGATTGGCCAGGTGTTGGACGCTGATGGTAATGTCAAGGTGAAGAATTGCTATTGTGGT 1200
1141 AAGATTGGCCAGGTGTTGGACGCTGATGGTAATGTCAAGGTGAAGAATTGCTATTGTGGT 1200
381 -K--I--G--Q--V--L--D--A--D--G--N--V--K--V--K--N--C--Y--C--G- 400
1201 TCGGCGAAGTGCAGTGGTAGGCTCTACTGA 1230
1201 TCGGCGAAGTGCAGTGGTAGGCTCTACTGA 1230
401 -S--A--K--C--S--G--R--L--Y--*- 409
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