[["rect",[150,5,152,10],{"title":"Exon: Bra038022.1.exon1; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 1 ; Last aa: 5 ; Start phase: 0; End phase: 2; Length: 15bp, 5 aa"}],["rect",[151,5,160,10],{"title":"Exon: Bra038022.1.exon2; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 6 ; Last aa: 39 ; Start phase: 0; End phase: 2; Length: 102bp, 34 aa"}],["rect",[159,5,176,10],{"title":"Exon: Bra038022.1.exon3; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 40 ; Last aa: 110 ; Start phase: 0; End phase: 2; Length: 213bp, 71 aa"}],["rect",[175,5,768,10],{"title":"Exon: Bra038022.1.exon4; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 111 ; Last aa: 2669 ; Start phase: 0; End phase: 2; Length: 7677bp, 2559 aa"}],["rect",[767,5,791,10],{"title":"Exon: Bra038022.1.exon5; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 2670 ; Last aa: 2768 ; Start phase: 0; End phase: 2; Length: 297bp, 99 aa"}],["rect",[790,5,806,10],{"title":"Exon: Bra038022.1.exon6; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 2769 ; Last aa: 2836 (1st base); Start phase: 0; End phase: 0; Length: 202bp, 67 1/3 aa"}],["rect",[805,5,827,10],{"title":"Exon: Bra038022.1.exon7; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 2836 (2nd base); Last aa: 2924 ; Start phase: 1; End phase: 2; Length: 266bp, 88 2/3 aa"}],["rect",[826,5,848,10],{"title":"Exon: Bra038022.1.exon8; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 2925 ; Last aa: 3015 (2nd base); Start phase: 0; End phase: 1; Length: 272bp, 90 2/3 aa"}],["rect",[846,5,934,10],{"title":"Exon: Bra038022.1.exon9; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 3015 (3rd base); Last aa: 3387 ; Start phase: 2; End phase: 2; Length: 1117bp, 372 1/3 aa"}],["rect",[933,5,945,10],{"title":"Exon: Bra038022.1.exon10; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 3388 ; Last aa: 3436 ; Start phase: 0; End phase: 2; Length: 147bp, 49 aa"}],["rect",[944,5,952,10],{"title":"Exon: Bra038022.1.exon11; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 3437 ; Last aa: 3463 ; Start phase: 0; End phase: 2; Length: 81bp, 27 aa"}],["rect",[950,5,969,10],{"title":"Exon: Bra038022.1.exon12; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 3464 ; Last aa: 3539 (1st base); Start phase: 0; End phase: 0; Length: 226bp, 75 1/3 aa"}],["rect",[968,5,980,10],{"title":"Exon: Bra038022.1.exon13; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 3539 (2nd base); Last aa: 3585 ; Start phase: 1; End phase: 2; Length: 140bp, 46 2/3 aa"}],["rect",[979,5,988,10],{"title":"Exon: Bra038022.1.exon14; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 3586 ; Last aa: 3621 (2nd base); Start phase: 0; End phase: 1; Length: 107bp, 35 2/3 aa"}],["rect",[987,5,996,10],{"title":"Exon: Bra038022.1.exon15; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra038022;r=A06:69204-81670;t=Bra038022.1\">A06:69204-81670</a>; First aa: 3621 (3rd base); Last aa: 3655 ; Start phase: 2; End phase: 2; Length: 103bp, 34 1/3 aa"}],["rect",[15,5,94,19],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","6zmXcKL4"]}],["rect",[355,20,364,25],{"title":"MobiDB lite; Position: 888-924"}],["rect",[613,20,631,25],{"title":"MobiDB lite; Position: 2005-2078"}],["rect",[616,20,621,25],{"title":"MobiDB lite; Position: 2017-2034"}],["rect",[620,20,631,25],{"title":"MobiDB lite; Position: 2035-2078"}],["rect",[638,20,644,25],{"title":"MobiDB lite; Position: 2114-2134"}],["rect",[640,20,644,25],{"title":"MobiDB lite; Position: 2120-2134"}],["rect",[700,20,708,25],{"title":"MobiDB lite; Position: 2381-2410"}],["rect",[733,20,743,25],{"title":"MobiDB lite; Position: 2523-2561"}],["rect",[733,20,743,25],{"title":"MobiDB lite; Position: 2523-2562"}],["rect",[832,20,839,25],{"title":"MobiDB lite; Position: 2951-2979"}],["rect",[832,20,839,25],{"title":"MobiDB lite; Position: 2953-2979"}],["rect",[15,20,82,34],{"klass":["label","yUcJynxR"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[169,36,173,41],{"title":"Low complexity (Seg); Position: 86-97"}],["rect",[222,36,225,41],{"title":"Low complexity (Seg); Position: 315-324"}],["rect",[233,36,239,41],{"title":"Low complexity (Seg); Position: 360-382"}],["rect",[265,36,268,41],{"title":"Low complexity (Seg); Position: 498-509"}],["rect",[313,36,317,41],{"title":"Low complexity (Seg); Position: 708-720"}],["rect",[491,36,495,41],{"title":"Low complexity (Seg); Position: 1478-1491"}],["rect",[541,36,545,41],{"title":"Low complexity (Seg); Position: 1695-1708"}],["rect",[586,36,595,41],{"title":"Low complexity (Seg); Position: 1888-1922"}],["rect",[626,36,630,41],{"title":"Low complexity (Seg); Position: 2060-2073"}],["rect",[639,36,648,41],{"title":"Low complexity (Seg); Position: 2117-2153"}],["rect",[653,36,658,41],{"title":"Low complexity (Seg); Position: 2176-2193"}],["rect",[693,36,696,41],{"title":"Low complexity (Seg); Position: 2349-2360"}],["rect",[709,36,713,41],{"title":"Low complexity (Seg); Position: 2420-2431"}],["rect",[768,36,773,41],{"title":"Low complexity (Seg); Position: 2674-2690"}],["rect",[830,36,834,41],{"title":"Low complexity (Seg); Position: 2944-2957"}],["rect",[862,36,866,41],{"title":"Low complexity (Seg); Position: 3081-3095"}],["rect",[901,36,905,41],{"title":"Low complexity (Seg); Position: 3251-3262"}],["rect",[15,36,136,50],{"klass":["label","IRdgdsXv"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[168,52,645,66],{"title":"Superfamily SSF48371; Positions: 81-2137; Interpro: IPR016024; Armadillo-type fold","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682650;r=A06:69204-81670;t=Bra038022.1;track=domain_superfamily;translation_id=15838"}],["rect",[907,52,1100,66],{"title":"Superfamily SSF56204; Positions: 3275-3646; Interpro: IPR035983; HECT, E3 ligase catalytic domain","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682648;r=A06:69204-81670;t=Bra038022.1;track=domain_superfamily;translation_id=15838"}],["rect",[442,71,563,85],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682649;r=A06:69204-81670;t=Bra038022.1;track=domain_superfamily;translation_id=15838","title":"Superfamily SSF46934; Positions: 1265-1323; Interpro: IPR009060; UBA-like superfamily"}],["rect",[15,52,82,66],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","KcE95MoT"]}],["rect",[446,94,609,108],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17031811;r=A06:69204-81670;t=Bra038022.1;track=domain_smart;translation_id=15838","title":"SMART SM00165; Positions: 1281-1319; Interpro: IPR015940; Ubiquitin-associated domain"}],["rect",[915,94,996,108],{"title":"SMART SM00119; Positions: 3311-3654; Interpro: IPR000569; HECT domain","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17031813;r=A06:69204-81670;t=Bra038022.1;track=domain_smart;translation_id=15838"}],["rect",[15,94,46,108],{"klass":["label","UYyLISdN"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[745,136,956,150],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318361;r=A06:69204-81670;t=Bra038022.1;track=domain_pfam;translation_id=15838","title":"Pfam PF14377; Positions: 2573-2679; Interpro: IPR025527; HUWE1/REV1, ubiquitin-binding motif"}],["rect",[245,136,570,150],{"title":"Pfam PF06025; Positions: 412-770; Interpro: IPR010314; E3 ubiquitin ligase, domain of unknown function DUF913","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318363;r=A06:69204-81670;t=Bra038022.1;track=domain_pfam;translation_id=15838"}],["rect",[169,155,494,169],{"title":"Pfam PF06012; Positions: 84-352; Interpro: IPR010309; E3 ubiquitin ligase, domain of unknown function DUF908","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318365;r=A06:69204-81670;t=Bra038022.1;track=domain_pfam;translation_id=15838"}],["rect",[446,174,609,188],{"title":"Pfam PF22562; Positions: 1281-1322; Interpro: IPR015940; Ubiquitin-associated domain","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318367;r=A06:69204-81670;t=Bra038022.1;track=domain_pfam;translation_id=15838"}],["rect",[923,155,995,169],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318366;r=A06:69204-81670;t=Bra038022.1;track=domain_pfam;translation_id=15838","title":"Pfam PF00632; Positions: 3343-3653; Interpro: IPR000569; HECT domain"}],["rect",[15,136,40,150],{"klass":["label","UK0slD20"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[445,189,608,203],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318357;r=A06:69204-81670;t=Bra038022.1;track=domain_pfscan;translation_id=15838","title":"PROSITE profiles PS50030; Positions: 1279-1320; Interpro: IPR015940; Ubiquitin-associated domain"}],["rect",[916,189,996,203],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318359;r=A06:69204-81670;t=Bra038022.1;track=domain_pfscan;translation_id=15838","title":"PROSITE profiles PS50237; Positions: 3313-3654; Interpro: IPR000569; HECT domain"}],["rect",[456,208,619,222],{"title":"PROSITE profiles PS50330; Positions: 1326-1345; Interpro: IPR003903; Ubiquitin interacting motif","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318358;r=A06:69204-81670;t=Bra038022.1;track=domain_pfscan;translation_id=15838"}],["rect",[15,189,112,203],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","8AmiuaIh"]}],["rect",[234,231,996,245],{"title":"PANTHER PTHR11254; Positions: 364-3654; Interpro: IPR050409; E3 ubiquitin-protein ligase","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=17318368;r=A06:69204-81670;t=Bra038022.1;track=domain_hmmpanther;translation_id=15838"}],["rect",[15,231,58,245],{"klass":["label","TnKezssh"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[939,253,1012,267],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682645;r=A06:69204-81670;t=Bra038022.1;track=domain_gene3d;translation_id=15838","title":"Gene3D 3.30.2160.10; Positions: 3414-3498"}],["rect",[166,253,299,267],{"title":"Gene3D 1.25.10.10; Positions: 72-462; Interpro: IPR011989; Armadillo-like helical","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682642;r=A06:69204-81670;t=Bra038022.1;track=domain_gene3d;translation_id=15838"}],["rect",[904,272,977,286],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682643;r=A06:69204-81670;t=Bra038022.1;track=domain_gene3d;translation_id=15838","title":"Gene3D 3.90.1750.10; Positions: 3264-3531"}],["rect",[967,291,1040,305],{"title":"Gene3D 3.30.2410.10; Positions: 3535-3654","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682637;r=A06:69204-81670;t=Bra038022.1;track=domain_gene3d;translation_id=15838"}],["rect",[753,253,832,267],{"title":"Gene3D 6.10.250.1630; Positions: 2609-2645","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682641;r=A06:69204-81670;t=Bra038022.1;track=domain_gene3d;translation_id=15838"}],["rect",[445,253,500,267],{"title":"Gene3D 1.10.8.10; Positions: 1278-1350","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16682632;r=A06:69204-81670;t=Bra038022.1;track=domain_gene3d;translation_id=15838"}],["rect",[15,253,52,267],{"klass":["label","B6ok0YXA"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[911,306,995,320],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16933249;r=A06:69204-81670;t=Bra038022.1;track=domain_cdd;translation_id=15838","title":"CDD cd00078; Positions: 3292-3652; Interpro: IPR000569; HECT domain"}],["rect",[446,306,489,320],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra038022;pf_id=16933250;r=A06:69204-81670;t=Bra038022.1;track=domain_cdd;translation_id=15838","title":"CDD cd14327; Positions: 1284-1320"}],["rect",[15,306,34,320],{"klass":["label","NFe1YBgL"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[15,348,70,362],{"klass":["label","of8QiA0Y"],"alt":"Brassica rapa (Brassica rapa)"}]]
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Protein fingerprints (groups of conserved motifs) from the PRINTS database.
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NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
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Protein domains and motifs from the TIGRFAM database.
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Protein domains and motifs from the PROSITE patterns database.
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