[["rect",[150,5,197,10],{"title":"Exon: Bra020400.1.exon1; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 1 ; Last aa: 45 ; Start phase: 0; End phase: 2; Length: 135bp, 45 aa"}],["rect",[195,5,236,10],{"title":"Exon: Bra020400.1.exon2; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 46 ; Last aa: 84 (1st base); Start phase: 0; End phase: 0; Length: 115bp, 38 1/3 aa"}],["rect",[234,5,273,10],{"title":"Exon: Bra020400.1.exon3; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 84 (2nd base); Last aa: 121 (1st base); Start phase: 1; End phase: 0; Length: 111bp, 37 aa"}],["rect",[271,5,332,10],{"title":"Exon: Bra020400.1.exon4; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 121 (2nd base); Last aa: 178 ; Start phase: 1; End phase: 2; Length: 173bp, 57 2/3 aa"}],["rect",[330,5,442,10],{"title":"Exon: Bra020400.1.exon5; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 179 ; Last aa: 286 ; Start phase: 0; End phase: 2; Length: 324bp, 108 aa"}],["rect",[440,5,484,10],{"title":"Exon: Bra020400.1.exon6; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 287 ; Last aa: 328 ; Start phase: 0; End phase: 2; Length: 126bp, 42 aa"}],["rect",[482,5,911,10],{"title":"Exon: Bra020400.1.exon7; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 329 ; Last aa: 750 (1st base); Start phase: 0; End phase: 0; Length: 1264bp, 421 1/3 aa"}],["rect",[909,5,940,10],{"title":"Exon: Bra020400.1.exon8; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 750 (2nd base); Last aa: 778 (2nd base); Start phase: 1; End phase: 1; Length: 85bp, 28 1/3 aa"}],["rect",[938,5,998,10],{"title":"Exon: Bra020400.1.exon9; Location: <a href=\"/Brassica_rapa/Location/View?db=core;g=Bra020400;r=A02:6557100-6560398;t=Bra020400.1\">A02:6557100-6560398</a>; First aa: 778 (3rd base); Last aa: 834 ; Start phase: 2; End phase: 2; Length: 169bp, 56 1/3 aa"}],["rect",[15,5,94,19],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","Ix0d1qsx"]}],["rect",[725,20,751,25],{"title":"MobiDB lite; Position: 567-592"}],["rect",[151,20,181,25],{"title":"MobiDB lite; Position: 1-30"}],["rect",[962,20,996,25],{"title":"MobiDB lite; Position: 801-833"}],["rect",[908,20,924,25],{"title":"MobiDB lite; Position: 748-763"}],["rect",[768,20,819,25],{"title":"MobiDB lite; Position: 610-659"}],["rect",[859,20,874,25],{"title":"MobiDB lite; Position: 699-713"}],["rect",[874,20,892,25],{"title":"MobiDB lite; Position: 714-731"}],["rect",[859,20,929,25],{"title":"MobiDB lite; Position: 699-767"}],["rect",[796,20,819,25],{"title":"MobiDB lite; Position: 637-659"}],["rect",[151,20,173,25],{"title":"MobiDB lite; Position: 1-22"}],["rect",[725,20,749,25],{"title":"MobiDB lite; Position: 567-590"}],["rect",[15,20,82,34],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","dtjbg7hy"]}],["rect",[165,36,178,41],{"title":"Low complexity (Seg); Position: 15-27"}],["rect",[769,36,779,41],{"title":"Low complexity (Seg); Position: 611-620"}],["rect",[945,36,958,41],{"title":"Low complexity (Seg); Position: 784-796"}],["rect",[971,36,984,41],{"title":"Low complexity (Seg); Position: 810-822"}],["rect",[15,36,136,50],{"klass":["label","95rqEDvN"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[869,52,897,57],{"title":"Coiled-coils (Ncoils); Position: 709-736"}],["rect",[15,52,142,66],{"klass":["label","K3HXsnll"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[151,68,996,73],{"title":"AFDB-ENSP mappings; Position: 1-833"}],["rect",[15,68,124,82],{"klass":["label","hDD0iPem"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[196,84,505,98],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra020400;pf_id=16592070;r=A02:6557100-6560398;t=Bra020400.1;track=domain_superfamily;translation_id=18818","title":"Superfamily SSF54001; Positions: 46-349; Interpro: IPR038765; Papain-like cysteine peptidase superfamily"}],["rect",[15,84,82,98],{"klass":["label","fXy8Xfjy"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[197,106,510,120],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra020400;pf_id=17256210;r=A02:6557100-6560398;t=Bra020400.1;track=domain_pfam;translation_id=18818","title":"Pfam PF00443; Positions: 47-347; Interpro: IPR001394; Peptidase C19, ubiquitin carboxyl-terminal hydrolase"}],["rect",[15,106,40,120],{"klass":["label","zsbfhC4F"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[197,128,506,142],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra020400;pf_id=17256209;r=A02:6557100-6560398;t=Bra020400.1;track=domain_pfscan;translation_id=18818","title":"PROSITE profiles PS50235; Positions: 47-350; Interpro: IPR028889; Ubiquitin specific protease domain"}],["rect",[15,128,112,142],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","suBf4Wrk"]}],["rect",[198,150,457,164],{"title":"PROSITE patterns PS00972; Positions: 48-63; Interpro: IPR018200; Ubiquitin specific protease, conserved site","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra020400;pf_id=17256206;r=A02:6557100-6560398;t=Bra020400.1;track=domain_scanprosite;translation_id=18818"}],["rect",[446,169,705,183],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra020400;pf_id=17256207;r=A02:6557100-6560398;t=Bra020400.1;track=domain_scanprosite;translation_id=18818","title":"PROSITE patterns PS00973; Positions: 292-310; Interpro: IPR018200; Ubiquitin specific protease, conserved site"}],["rect",[15,150,112,164],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","3Blqp4qr"]}],["rect",[177,192,526,206],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra020400;pf_id=17256208;r=A02:6557100-6560398;t=Bra020400.1;track=domain_hmmpanther;translation_id=18818","title":"PANTHER PTHR24006; Positions: 27-370; Interpro: IPR050164; Ubiquitin carboxyl-terminal hydrolases"}],["rect",[15,192,58,206],{"klass":["label","0d4CXhZy"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[193,214,516,228],{"href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra020400;pf_id=16592068;r=A02:6557100-6560398;t=Bra020400.1;track=domain_gene3d;translation_id=18818","title":"Gene3D 3.90.70.10; Positions: 43-360"}],["rect",[15,214,52,228],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","T45oHIFX"]}],["rect",[196,236,504,250],{"title":"CDD cd02661; Positions: 46-348","href":"/Brassica_rapa/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=Bra020400;pf_id=16912117;r=A02:6557100-6560398;t=Bra020400.1;track=domain_cdd;translation_id=18818"}],["rect",[15,236,34,250],{"klass":["label","Qn28FwDP"],"alt":"Brassica rapa (Brassica rapa)"}],["rect",[15,258,70,272],{"alt":"Brassica rapa (Brassica rapa)","klass":["label","6dQ9xN4R"]}]]
NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
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Protein domains and motifs from the TIGRFAM database.
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Protein domains and motifs from the SMART database.
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Protein fingerprints (groups of conserved motifs) from the PRINTS database.
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