Brassica rapa (Brapa_1.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
AT2G19410 (E=0.0) | protein kinase family protein
Chromosome A07: 927,910-931,502 forward strand.
This transcript has 10 exons and is annotated with 25 domains and features.
This transcript is a product of gene Bra038999 Show transcript tableHide transcript table
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| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........taagtaaattgatatagatggtggaaatgttgacgcaaaagggtcgagag
| ||||||
| 1 | Bra038999.1.exon1 | 927,910 | 928,114 | 0 | 1 | 205 |
ATGAGCAGCGGTGGTGGTGGTGGTCCAAAGGCAGATGAGGGTGAGTTGTATGTGGCGGTG GCCGTGAAGGGTATCATCGGAGATAAGTTGGGAGGAGCAGGAAGCCGCCGCGCAGTACGG TGGGCCGTCGATAACCTTTTACCTAAGGCTGATCGGTTTGTGATGATCCATGTCATCCCA CCCATTAGTACTATCCCTACCCCTA |
| Intron 1-2 | 928,115 | 928,410 | 296 |
gtaagtctctcattcaaacatttca..........tttatgctaatggcgtttgctgcag
| |||
| 2 | Bra038999.1.exon2 | 928,411 | 928,538 | 1 | 0 | 128 |
ACGGAGAGAGATTGCCCCTGGAGGAAGTTGAGGAGAGATTGGTGGAAATGTATGTGAGAG ACGTGAAACAAGAATTTGAAACAGTCTTCGTTCCCTTCTTGAAAATGTGCAAGAGTAATC GTACCAAG |
| Intron 2-3 | 928,539 | 928,619 | 81 |
gttggttcatttttaaatctataaa..........aatccctgaaatatttaaccttcag
| |||
| 3 | Bra038999.1.exon3 | 928,620 | 928,741 | 0 | 2 | 122 |
TGTCAGGTAGAGACTCTCTTGATAGAGTATGATGATCCTGCAAAAGCGCTTCTACGATTC ATATACAAATCAGGAGTTAACAGTTTGGTTATGGGATCAATTAATTCAAACATATTCACA CG |
| Intron 3-4 | 928,742 | 928,822 | 81 |
gtatgtaaaatagctctgtttggtt..........aaccggctggattattatggtttag
| |||
| 4 | Bra038999.1.exon4 | 928,823 | 928,944 | 2 | 1 | 122 |
GAGAGCAAAAAGTCCAGGAGTGCCATTGACTGTCTTAACATACGCTCCCGAAACATGTGA AGTATACATTGTATGCAGAGACAGAATCACTACAAAATCTATGGATCCACTAATCAATGC AG |
| Intron 4-5 | 928,945 | 929,046 | 102 |
gtataaaataaacaaaaagattatc..........cgtgtttaaccgtctaattattcag
| |||
| 5 | Bra038999.1.exon5 | 929,047 | 929,160 | 1 | 1 | 114 |
CGCCGTGCACAAGTCCAAAAGCAGCTGCGACCGCCCGGCGTTTCCTGAAAGACGGGGCGG CTAGCTTCCACACTGTACCGACTCAAACTTCATCTGTTCCTGGAGAATCAATAG |
| Intron 5-6 | 929,161 | 929,399 | 239 |
gtaatttaaaaaaaataaaatatcc..........tcttttttttcttatgttactgaag
| |||
| 6 | Bra038999.1.exon6 | 929,400 | 929,668 | 1 | 0 | 269 |
AGGTAGGCACAAGGAGGTCAGCATCGGCTAAAGAGTTGAGATTGGAGGCATTAAGCCTCG CTATTAGGGAACCGGAAACACCTCAAAGTAGCAAGGCTTCTAGTGCAACAGTTCAAGATG TTATAAGGCGCCGTGGAGGATCAGATATTCCACAGCTAAATTACTCAGATTTTGATGAAA CATCGGAACAAAAGTCAAGTATTGAGAACATTGTCAAGGAACAAAGAGACTCTAGTCCGC CACCCGCAACATGTAGAAAATCCAAGAAG |
| Intron 6-7 | 929,669 | 929,752 | 84 |
gtacttaacatcatcttttggttca..........gaagacttggtgtttgttttgacag
| |||
| 7 | Bra038999.1.exon7 | 929,753 | 929,854 | 0 | 0 | 102 |
GTTGAGATTGAAGCAGAGGTAGAGCGTTTGAAAAAAGAGTTACAAAATACAGTTGTTAAA TATAAACAAGCTTGTGAAGAGCTTTTCTCCACACAAAACAAG |
| Intron 7-8 | 929,855 | 929,938 | 84 |
gtacattcacactaagcgacctctg..........gtgattctgttgggttttctgctag
| |||
| 8 | Bra038999.1.exon8 | 929,939 | 930,367 | 0 | 0 | 429 |
GTTCAAGTAATGTCGTCTGAATGTTCCAAAGACGCTAGAAGAGTGAACAATGCTGTGGAG AAAGAAGTGCTGCACAGAAAAACCGCGGCGCTGGAGAAAGAGCGGCACATGAAAGCGATT AAAGAGGTAGAAGCAGCGAAAGCGTTACTTGCGAGAGAGTACTGTCAGCGACAAATCGCG GAGGTTAATGCTTTAAAGAATTACTTGGAGAAGAAGAAAGTGATTGACCAGCTTTTAGGG ACGGATCAACGGTACAGGAAGTACACAATCGAAGAGATTTTTATAGCCACCGAAGGATTC TCGCCGGAGAAAGTGATCGGAGAAGGAGGATACGGTAAAGTTTACCGGTGTAGCCTTGAT AGTACTCCAGCGGCTGTTAAAGTTGTCCGGCTAGATACGCCGGAGAAGAAACAAGAGTTC TTGAAAGAG |
| Intron 8-9 | 930,368 | 930,451 | 84 |
gtgggcttgtgacttaacatttaaa..........tcggtttggtattattactatatag
| |||
| 9 | Bra038999.1.exon9 | 930,452 | 931,201 | 0 | 0 | 750 |
GTTGAGGTTCTGAGCCAGCTCCGACACCCACACGTGGTTCTTCTCCTAGGAGCTTGTCCG GAGAATGGTTGTCTGGTTTACGAGTATTTGGAAAATGGAAGCCTCGAGGAATACATATTT CACCAGAAAAATAAACCGCCTTTGCCTTGGTTTATCCGGTTTAGGGTTATTTTCGAGGTA GCTTGCGGTTTAGCCTTCTTGCACAGTTCTAAACCGGAACCGATTGTTCACCGTGATCTA AAACCGGGAAACATCTTGTTGAACCGGAACTACGTGAGCAAAATCGCAGACGTCGGTTTA GCCAAGCTGGTTACGGATGTTGCACCTGATAATGTAACAATGTACCGGCACTCGGTTCTT GCTGGTACATTGCATTACATTGACCCGGAGTACCATCGTACCGGAACGATTAGACTCAAG TCGGATCTTTATGCGTTCGGGATAATCATTCTTCAACTGTTGACGGCTCGTCAGCCAAAC GGGCTTGTACATGCCGTCGAAAATGCGGTTAATAAAGGAACACTAACCGAAATGCTAGAC AAATCGGTTACAGATTGGCCTTTGGCAGAAACCGAGGAGTTGGCACGGATTGGTTTAAAA TGTGCGGAGTTTCGGTGCCGAGATAGACCGGATCTTAAAGAAGAGGTTATACCGGTTTTG AAACGACTTGTAGAGACTGCAAATTCAAAGATAAAGAAAGAACGAAGCAATTTACGTGCA CCAAGTCATTACTTTTGTCCCATCTTACGA |
| Intron 9-10 | 931,202 | 931,289 | 88 |
gtgagtacaagcttacccggttctg..........gatttttaatttgttttgtaaacag
| |||
| 10 | Bra038999.1.exon10 | 931,290 | 931,502 | 0 | 0 | 213 |
GAGATAATGGAGGAGCCAGAGATTGCAGCTGATGGATTCACGTATGAGAAGAAAGCGATC TTAGCGTGGCTTGAGAAACACAACATTTCACCAGTAACACGACAAAAGCTCGACCACTTC AAGCTCACACCAAACAATACACTCCGGTCTGCTATTCACGATTGGAAATCAAGAGTCCGG TTTTCTAATGCCGTTGTTAATATAACAGGTTGA |
| 3' downstream sequence |
tttctcactctggaaattttcaaaagaaaatattggagttgtaatgtttt..........
|
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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