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    Transcript: Bra038022.1

    Description

    AT1G70320 (E=0.0) UPL2 | UPL2 (UBIQUITIN-PROTEIN LIGASE 2); ubiquitin-protein ligase

    Location

    Chromosome A06: 69,204-81,670 forward strand.

    About this transcript

    This transcript has 15 exons and is annotated with 63 domains and features.

    Gene

    This transcript is a product of gene Bra038022 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    -Bra038022.1109653654aa
     
    Protein coding
    		M4FAA8 -Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    Gene3D12781350-1.10.8.10-
    CDD12841320-cd14327-
    Gene3D26092645-6.10.250.1630-
    Gene3D32643531-3.90.1750.10-
    Gene3D34143498-3.30.2160.10-
    Gene3D35353654-3.30.2410.10-
    Gene3D72462Armadillo-like helical1.25.10.10IPR011989 [Display all genes with this domain]
    Superfamily812137Armadillo-type foldSSF48371IPR016024 [Display all genes with this domain]
    Pfam84202E3 ubiquitin ligase, domain of unknown function DUF908PF06012IPR010309 [Display all genes with this domain]
    Pfam200352E3 ubiquitin ligase, domain of unknown function DUF908PF06012IPR010309 [Display all genes with this domain]
    Pfam412770E3 ubiquitin ligase, domain of unknown function DUF913PF06025IPR010314 [Display all genes with this domain]
    PANTHER2173652E3 ubiquitin-protein ligasePTHR11254IPR050409 [Display all genes with this domain]
    CDD32923652HECT domaincd00078IPR000569 [Display all genes with this domain]
    SMART33113654HECT domainSM00119IPR000569 [Display all genes with this domain]
    PROSITE profiles33133654HECT domainPS50237IPR000569 [Display all genes with this domain]
    Pfam33433653HECT domainPF00632IPR000569 [Display all genes with this domain]
    Superfamily32753646HECT, E3 ligase catalytic domainSSF56204IPR035983 [Display all genes with this domain]
    Pfam25732602HUWE1/REV1, ubiquitin-binding motifPF14377IPR025527 [Display all genes with this domain]
    Pfam26122642HUWE1/REV1, ubiquitin-binding motifPF14377IPR025527 [Display all genes with this domain]
    Pfam26462679HUWE1/REV1, ubiquitin-binding motifPF14377IPR025527 [Display all genes with this domain]
    Superfamily12651323UBA-like superfamilySSF46934IPR009060 [Display all genes with this domain]
    PROSITE profiles13261345Ubiquitin interacting motifPS50330IPR003903 [Display all genes with this domain]
    PROSITE profiles12791320Ubiquitin-associated domainPS50030IPR015940 [Display all genes with this domain]
    SMART12811319Ubiquitin-associated domainSM00165IPR015940 [Display all genes with this domain]
    Pfam12811322Ubiquitin-associated domainPF22562IPR015940 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite888924
    MobiDBLite16901711
    MobiDBLite20052015
    MobiDBLite20052078
    MobiDBLite20162027
    MobiDBLite20402049
    MobiDBLite21142147
    MobiDBLite21192147
    MobiDBLite23362356
    MobiDBLite23812432
    MobiDBLite23862399
    MobiDBLite24202431
    MobiDBLite24882502
    MobiDBLite24882562
    MobiDBLite25432553
    MobiDBLite29512979
    Phobius11471
    Phobius14721489
    Phobius14901804
    Phobius18051825
    Phobius18263654
    Seg8697
    Seg315324
    Seg360382
    Seg498509
    Seg708720
    Seg14781491
    Seg16951708
    Seg18881922
    Seg20602073
    Seg21172153
    Seg21762193
    Seg23492360
    Seg24202431
    Seg26742690
    Seg29442957
    Seg30813095
    Seg32513262

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