Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bra023609.1

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Description

AT5G17290 (E=2e-164) ATG5, APG5, ATATG5 | APG5 (AUTOPHAGY 5); transporter

Location

Chromosome A02: 4,172,539-4,174,757 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene Bra023609 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	Bra023609.1	1026	341aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4E4A6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	201	338	-	3.10.20.90	-
Pfam	12	105	Autophagy protein ATG5, UblA domain	PF20638	IPR048939 [Display all genes with this domain]
Pfam	211	334	Autophagy protein ATG5, UblB domain	PF04106	IPR048318 [Display all genes with this domain]
Pfam	119	175	Autophagy protein ATG5, alpha-helical bundle region	PF20637	IPR048940 [Display all genes with this domain]
Gene3D	3	108	Autophagy protein Atg5, UblA domain	3.10.20.620	IPR042527 [Display all genes with this domain]
Gene3D	109	178	Autophagy protein Atg5, helix rich domain	1.10.246.190	IPR042526 [Display all genes with this domain]
PANTHER	1	337	Autophagy-related protein 5	PTHR13040	IPR007239 [Display all genes with this domain]

Other features

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Feature type	Start	End
Seg	32	42
Alphafold	1	341

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