Brassica rapa (Brapa_1.0)
Description

AT2G19410 (E=0.0) | protein kinase family protein

Location
About this transcript

This transcript has 14 exons and is annotated with 35 domains and features.

Gene

This transcript is a product of gene Bra012181 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
-Bra012181.130331010aa
 
Protein coding
M4D6S1 -Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
CDD222381-cd01989-
Superfamily238371-SSF52402-
Gene3D626719-3.30.200.20-
Gene3D720931-1.10.510.10-
Superfamily927999-SSF57850-
CDD931985-cd16655-
PROSITE profiles647910Protein kinase domainPS50011IPR000719 [Display all genes with this domain]
SMART647910Protein kinase domainSM00220IPR000719 [Display all genes with this domain]
PROSITE patterns653674Protein kinase, ATP binding sitePS00107IPR017441 [Display all genes with this domain]
Superfamily631904Protein kinase-like domain superfamilySSF56112IPR011009 [Display all genes with this domain]
Gene3D234388Rossmann-like alpha/beta/alpha sandwich fold3.40.50.620IPR014729 [Display all genes with this domain]
Pfam650904Serine-threonine/tyrosine-protein kinase, catalytic domainPF07714IPR001245 [Display all genes with this domain]
PROSITE patterns765777Serine/threonine-protein kinase, active sitePS00108IPR008271 [Display all genes with this domain]
PROSITE profiles9291002U-box domainPS51698IPR003613 [Display all genes with this domain]
Pfam930997U-box domainPF04564IPR003613 [Display all genes with this domain]
SMART933995U-box domainSM00504IPR003613 [Display all genes with this domain]
PANTHER222998U-box domain-containing ubiquitin ligasesPTHR45647IPR051348 [Display all genes with this domain]
Gene3D9321002Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite174197
MobiDBLite422467
MobiDBLite427447
MobiDBLite449467
MobiDBLite489511
Phobius111
Phobius128
Phobius1223
Phobius2428
Phobius291010
Seg145159
Seg228238
Seg263273
TMHMM1335
Alphafold11010
Ncoils506544
Ncoils552572