Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: Bra010425.1

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Description

AT4G26840 (E=4e-051) SUM1, SUMO 1, SUMO1, ATSUMO1 | SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag

Location

Chromosome A08: 14,469,095-14,470,093 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene Bra010425 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	Bra010425.1	306	101aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4D1S5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	1	93	-	3.10.20.90	-
PANTHER	5	93	-	PTHR10562	-
CDD	16	89	-	cd16116	-
Pfam	18	88	Rad60/SUMO-like domain	PF11976	IPR022617 [Display all genes with this domain]
PROSITE profiles	16	93	Ubiquitin-like domain	PS50053	IPR000626 [Display all genes with this domain]
SMART	18	89	Ubiquitin-like domain	SM00213	IPR000626 [Display all genes with this domain]
Superfamily	9	94	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	1	16
MobiDBLite	1	20
Alphafold	1	101

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