Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bra004123.1

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Description

AT1G65650 (E=3e-160) UCH2 | UCH2; ubiquitin thiolesterase/ ubiquitin-specific protease

Location

Chromosome A07: 16,967,479-16,969,450 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene Bra004123 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Bra004123.1	990	329aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4CIT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	3	220	-	cd09617	-
Gene3D	225	308	-	1.20.58.860	-
Superfamily	2	223	Papain-like cysteine peptidase superfamily	SSF54001	IPR038765 [Display all genes with this domain]
Pfam	269	313	Peptidase C12, C-terminal domain	PF18031	IPR041507 [Display all genes with this domain]
PANTHER	2	321	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PTHR10589	IPR001578 [Display all genes with this domain]
Pfam	3	206	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PF01088	IPR001578 [Display all genes with this domain]
Prints	5	22	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PR00707	IPR001578 [Display all genes with this domain]
Prints	40	52	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PR00707	IPR001578 [Display all genes with this domain]
Prints	76	93	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PR00707	IPR001578 [Display all genes with this domain]
Prints	152	163	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PR00707	IPR001578 [Display all genes with this domain]
Prints	168	178	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PR00707	IPR001578 [Display all genes with this domain]
Gene3D	1	224	Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamily	3.40.532.10	IPR036959 [Display all genes with this domain]
PIRSF	1	329	Ubiquitinyl hydrolase, UCH37 type	PIRSF038120	IPR017390 [Display all genes with this domain]

Other features

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Feature type	Start	End
Seg	28	41
Alphafold	1	329
Alphafold	1	329
Ncoils	218	252

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