Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Bra001451.1

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Description

AT3G12400 (E=2e-085) ELC, ATELC | ELC; ubiquitin binding

Location

Chromosome A03: 16,421,142-16,422,296 reverse strand.

About this transcript

This transcript has 1 exon and is annotated with 14 domains and features.

Gene

This transcript is a product of gene Bra001451 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Bra001451.1	1155	384aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4CB71	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	309	369	-	6.10.140.820	-
Superfamily	308	368	ESCRT assembly domain	SSF140111	IPR037202 [Display all genes with this domain]
PANTHER	7	373	ESCRT-I complex UEV domain-containing protein	PTHR23306	IPR052070 [Display all genes with this domain]
Pfam	303	365	Steadiness box (SB) domain	PF09454	IPR017916 [Display all genes with this domain]
PROSITE profiles	308	376	Steadiness box (SB) domain	PS51312	IPR017916 [Display all genes with this domain]
PROSITE profiles	18	162	Ubiquitin E2 variant, N-terminal	PS51322	IPR008883 [Display all genes with this domain]
Pfam	38	158	Ubiquitin E2 variant, N-terminal	PF05743	IPR008883 [Display all genes with this domain]
Gene3D	6	159	Ubiquitin-conjugating enzyme/RWD-like	3.10.110.10	IPR016135 [Display all genes with this domain]
Superfamily	27	160	Ubiquitin-conjugating enzyme/RWD-like	SSF54495	IPR016135 [Display all genes with this domain]

Other features

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Feature type	Start	End
MobiDBLite	155	198
MobiDBLite	165	194
Seg	160	192
Alphafold	1	384
Ncoils	252	279

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